Gene Pfl01_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1443 
Symbol 
ID3717160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1616671 
End bp1617540 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content60% 
IMG OID 
Productputative lipoprotein 
Protein accessionYP_347175 
Protein GI77457670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGCT GGTTCAAACG CATCGCGATT CTACTGATCC TGACCCTCGC CCTCGGCGCC 
TGCAGCCGCG TCGGCCTGGC CTATCGCAAT CTCGACGTGA TCATTCCGTG GACACTCAGC
GACTACCTGG ACATGAACGG CGAGCAGAAA GGCTGGTTCA ACGAACGCCT CAGGGAACAC
CTGAGCTGGC ACTGCACCAC GCAGTTACCG GGTTATCTGG ACTGGCTCGA TCGCCTGCAA
ACCATGGTCG AGAACAATCA GGTCACCGAC ACCGCGCTGC AGGCCCGCAC CGCAGAGGCC
AAGCAGGCAA TCGCCGAAAC CGCCCGGGAA ATCACCCCGT CGGCGATTGA ATTGCTGCAA
GGCCTGGATG ATCGGCAGGT CGCTGAAATG AACGACGCCT TTGCCAAAGA CCTGCAAAAG
CGCCAGCAGG AATACCTCAA GCCTCCGCTG TCGCAGCAGA TTGCCGAACG TGGCGCGCGC
ATGGACAAGC GTCTCAACGA TTGGCTCGGC CCGTTGAGCG CGGAGCAGGA GCAACGGGTG
ATGGCCTGGT CGACCGCCCT GGGCGATCAG AACACCCAGT GGATCGCCAA CCGTGCTCAC
TGGCAGAAGC AGTTCAGCGC GGCGGTGGCG CAACGCAAAA GTCCCGAATT CCCACAACGG
ATCGAGACGC TTCTGGTCAA TCGCGAGCGT TTATGGACAG CGGATTACCA AAAGGCTTAC
GCCAATACCG AGGCGCAGGC CCGTTCGCTG TTCGTCGATC TGATGGCCGA CAGCACGCCG
CAGCAGCGCC AGCGCCTGTT GAAAAAGATC GAGGGGGTGC GCAAGGATTT CAATGACTTG
AAGTGCCTGA AGGCCGCACA AAAAAGCTGA
 
Protein sequence
MSSWFKRIAI LLILTLALGA CSRVGLAYRN LDVIIPWTLS DYLDMNGEQK GWFNERLREH 
LSWHCTTQLP GYLDWLDRLQ TMVENNQVTD TALQARTAEA KQAIAETARE ITPSAIELLQ
GLDDRQVAEM NDAFAKDLQK RQQEYLKPPL SQQIAERGAR MDKRLNDWLG PLSAEQEQRV
MAWSTALGDQ NTQWIANRAH WQKQFSAAVA QRKSPEFPQR IETLLVNRER LWTADYQKAY
ANTEAQARSL FVDLMADSTP QQRQRLLKKI EGVRKDFNDL KCLKAAQKS