| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1433 |
|---|
| Symbol | |
|---|
| ID | 3717150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1608006 |
|---|
| End bp | 1608887 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | carboxylate/amino acid/amine transporter |
|---|
| Protein accession | YP_347165 |
|---|
| Protein GI | 77457660 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.720857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.464968 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTATC TACTTTTTGT CACGCTGATC CAGGCGTTTT CCTTCAGTCT GATCGGCGAA
TACCTGGCCG GTCATGTCGA CAGCTACTTC GCGGTGCTGG TGCGGGTGGT GCTGGCCGGG
CTGGTGTTTA TCCCGCTGAC CCGCTGGCGC TCGGTGGAGC CGGCGTTCAT GCGCGGCATG
TTGCTGATCG GCGCGTTGCA GTTCGGCGTG ACCTACGTCT GCCTGTATCT GAGCTTCCGC
GTGCTGACGG TGCCGGAGGT GCTGCTGTTC ACCATCCTCA CGCCGCTGCA CGTGACGCTG
ATCGAAGACG CGCTCAACCG ACGCTTCAAC CCGTGGGCGC TGATCGCCGC ACTGGTGGCC
GTGTGCGGTG CTGCAGTGAT TCGCTACGAC CGGATCAACC CGGACTTCTT CATGGGCTTT
CTGCTGCTGC AACTGGCCAA CTTCACCTAC GCCGCCGGGC AGGTGCTGTA CAAACATCTG
GTGGCGAAGC ACCCGAGCGA TCTGCCGCAC TACCGGCGCT TCGGTTTCTT CTACCTCGGT
GCACTGGCGG TGGCGCTGCC GGCGTTCCTG CTGTTCGGCA AATCCAACTT CCTGCCGGAA
GCGCCGCTGC AATGGGGCGT GCTGGTGTTC CTCGGCCTGG TCTCGACCGC ACTCGGTCTG
TACTGGTGGA ACAAGGGTGC GTGCCTGGTC AACGGCGGCA CCCTGGCGGT GATGAACAAC
CTGCACGTGC CGGTGGGGCT GCTGCTGAAT CTGCTGATCT GGAATCAGCA CGAGGAGCTC
GGGCGGTTGT TCCTCGGTGG CAGCGTGATT CTGGCGGCGG TGTGGATCAG CCGGTTGGGG
ATTCGCCAGT CGGCGCCAAT TGCTCCACCA GAAACGCGAT AA
|
|---|
| Protein sequence | MGYLLFVTLI QAFSFSLIGE YLAGHVDSYF AVLVRVVLAG LVFIPLTRWR SVEPAFMRGM
LLIGALQFGV TYVCLYLSFR VLTVPEVLLF TILTPLHVTL IEDALNRRFN PWALIAALVA
VCGAAVIRYD RINPDFFMGF LLLQLANFTY AAGQVLYKHL VAKHPSDLPH YRRFGFFYLG
ALAVALPAFL LFGKSNFLPE APLQWGVLVF LGLVSTALGL YWWNKGACLV NGGTLAVMNN
LHVPVGLLLN LLIWNQHEEL GRLFLGGSVI LAAVWISRLG IRQSAPIAPP ETR
|
|---|
| |