Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1428 |
Symbol | |
ID | 3717184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1604361 |
End bp | 1604924 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
Protein accession | YP_347160 |
Protein GI | 77457655 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.348391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.155775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAAA AACTCGCCCT CGCCGCCGGC ACCGTGCTGT TCGCTGCCAA CCTGATGGCT GCCACGCCGG CAAAAGCACC GCACGTGCTG CTGGACACCA CCAACGGCCA GATCGAAATC GAGCTGGACC CGGTCAAGGC GCCGATCAGT ACCAAGAATT TCCTCGAGTA CGTCGACAGC GGCTTTTACA ACAACACGAT TTTCCACCGC GTGATCCCGG GCTTCATGGC CCAGGGCGGC GGCTTCACCC AGCAGATGCA GCAAAAAGAC ACCAAGGCGC CGATCAAGAA CGAAGCCAGC AACGGCCTGC ATAACGTTCG TGGCACCCTG TCGATGGCCC GTACTTCCAA CCCGGATTCG GCCACCAGCC AGTTCTTCAT CAACGTCGCC GACAACGCTT TCCTCGATCC GGGCCGTGAC GCCGGTTACG CGGTGTTCGC CAAAGTGGTC AAGGGCATGG ACGTGGTCGA CATCATCGTC AACTCCCAGA CCACCACCAA ACAGGGCATG CAAAACGTGC CGGTCGACCC TGTGATCATC AAGTCGGCCA AGCGCATCGA CTAA
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Protein sequence | MLKKLALAAG TVLFAANLMA ATPAKAPHVL LDTTNGQIEI ELDPVKAPIS TKNFLEYVDS GFYNNTIFHR VIPGFMAQGG GFTQQMQQKD TKAPIKNEAS NGLHNVRGTL SMARTSNPDS ATSQFFINVA DNAFLDPGRD AGYAVFAKVV KGMDVVDIIV NSQTTTKQGM QNVPVDPVII KSAKRID
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