Gene Pfl01_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1428 
Symbol 
ID3717184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1604361 
End bp1604924 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content60% 
IMG OID 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_347160 
Protein GI77457655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.348391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.155775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAA AACTCGCCCT CGCCGCCGGC ACCGTGCTGT TCGCTGCCAA CCTGATGGCT 
GCCACGCCGG CAAAAGCACC GCACGTGCTG CTGGACACCA CCAACGGCCA GATCGAAATC
GAGCTGGACC CGGTCAAGGC GCCGATCAGT ACCAAGAATT TCCTCGAGTA CGTCGACAGC
GGCTTTTACA ACAACACGAT TTTCCACCGC GTGATCCCGG GCTTCATGGC CCAGGGCGGC
GGCTTCACCC AGCAGATGCA GCAAAAAGAC ACCAAGGCGC CGATCAAGAA CGAAGCCAGC
AACGGCCTGC ATAACGTTCG TGGCACCCTG TCGATGGCCC GTACTTCCAA CCCGGATTCG
GCCACCAGCC AGTTCTTCAT CAACGTCGCC GACAACGCTT TCCTCGATCC GGGCCGTGAC
GCCGGTTACG CGGTGTTCGC CAAAGTGGTC AAGGGCATGG ACGTGGTCGA CATCATCGTC
AACTCCCAGA CCACCACCAA ACAGGGCATG CAAAACGTGC CGGTCGACCC TGTGATCATC
AAGTCGGCCA AGCGCATCGA CTAA
 
Protein sequence
MLKKLALAAG TVLFAANLMA ATPAKAPHVL LDTTNGQIEI ELDPVKAPIS TKNFLEYVDS 
GFYNNTIFHR VIPGFMAQGG GFTQQMQQKD TKAPIKNEAS NGLHNVRGTL SMARTSNPDS
ATSQFFINVA DNAFLDPGRD AGYAVFAKVV KGMDVVDIIV NSQTTTKQGM QNVPVDPVII
KSAKRID