Gene Pfl01_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1425 
Symbol 
ID3717181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1600416 
End bp1601540 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347157 
Protein GI77457652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.345024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC AACGTCTGCA CAAACTGTCG GAAATTCCAG CCTCCGACTG GGATGTTCTG 
GTTCCGCAAA ACCAGCCGTT TCTGCGCCAC GCCTTTCTGG CTTCGCTGGA AGACAGCGGC
AGCGTCGGCC CGCACACGGG CTGGCAAGCG GAGCATTTGC TGCACGTCGA CGCGGGGCGC
GTGATCGCGG CGCTGCCCGG TTATCGCAAA TGGCATTCCT ACGGTGAATA TGTGTTCGAT
CACGGCTGGG CCGATGCCTG CGCCCGGGCC GGCATCGATT ACTACCCCAA GTTTTTGAGC
GCCGTGCCGT TCAGTCCGGT CAGCGGCCCT CGGTTGTTGG CAGCGAATGT CGAAGATGGG
TTCGAACTGC TCAAGAGCCT GCCGGGGTAT CTGGAAATCG AAGAACTCTC CAGCGCCCAC
ATCAACTTCA CCGACGCGTT CACCGATGCC GCCATGGCCG GGCAGCCGGG CTGGCTGCAA
CGCATCGGCT GTCAGTATCA CTGGCAGAAT CGCGGCTACC GCGACTTTCA GGACTTCCTC
GACGTGCTCG CCTCGCGCAA GCGCAAACAG ATGCGCAAGG AGCGCGAACA AGTGGCGGGG
CAGGGCTTCG AGTTCGAATG GCTGGAAGGC CGCGAGCTGG ACGAGGCGCA GTGGGATTTC
GTCTACGCCT GTTACGCCAA CACCTACGCG GTGCGTCGGC AGGCGCCGTA CCTGACCCGG
GAATTCTTCA GCCTGCTGGC CGAGCGCATG CCGGAATCGA TTCGCGTGGT CCTGGCCCGA
CAGGGCTCAC GGCCGGTGGC GATGGCGTTC AGCCTGGTGG GCGGCGACAG TTTTTACGGA
CGCTACTGGG GATGCCTGGC CGAGTTCGAC CGGCTGCACT TCGAGACCTG TTTCTATCAG
GGCATGGACT ATGCGATTGC CAATGGATTT CAACGTTTCG ATGCCGGTGC CCAGGGCGAG
CACAAACTGA TTCGCGGCTT TGAACCGGTG ATCACCCATT CTTGGCATTA CCTGCGCCAT
CCCGGTTTGA AAGCTGCGGT CAAAGACTTC CTGCACCAGG AGCGCGCCGG TGTGCTGGCC
TATGCCGAAG AGGCGAGGAA CGCCTTGCCG TATCGGCAAG CCTGA
 
Protein sequence
MPLQRLHKLS EIPASDWDVL VPQNQPFLRH AFLASLEDSG SVGPHTGWQA EHLLHVDAGR 
VIAALPGYRK WHSYGEYVFD HGWADACARA GIDYYPKFLS AVPFSPVSGP RLLAANVEDG
FELLKSLPGY LEIEELSSAH INFTDAFTDA AMAGQPGWLQ RIGCQYHWQN RGYRDFQDFL
DVLASRKRKQ MRKEREQVAG QGFEFEWLEG RELDEAQWDF VYACYANTYA VRRQAPYLTR
EFFSLLAERM PESIRVVLAR QGSRPVAMAF SLVGGDSFYG RYWGCLAEFD RLHFETCFYQ
GMDYAIANGF QRFDAGAQGE HKLIRGFEPV ITHSWHYLRH PGLKAAVKDF LHQERAGVLA
YAEEARNALP YRQA