| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1422 |
|---|
| Symbol | |
|---|
| ID | 3717178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1597839 |
|---|
| End bp | 1598450 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | sigma-24 (FecI) |
|---|
| Protein accession | YP_347154 |
|---|
| Protein GI | 77457649 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.555265 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTG ACGACACCCG ATTGCTTGAG CGGCTGCTCG CCGGTGAGCA GAAGGCTTTC
AAGGAGCTGG TCAGCACCTA TCAAAGCCCC ATGCGCGCGG TGGCCTACGC GATTGTCGGC
CAGCGCCATG TCGAAGAAGT GGTGCAGGAC GCCTGGCTGT CGGTGGTGCG CAATATCGGC
CGTTTCGAGG GGCGCTCCAG CCTCAAGACC TGGCTGCTGA CCATCACCGC CAACTCGGCC
AAGAGCCGCT ACAAACTCAA TCGTCGCGAA GTGCTGCTGG ATGATCTGCC GTCCCCCCAC
GGCACCATCG ATGACGATCG TTTTTCTCCC GGCGACGGCC ACTGGCTGGT AGCACCGTTC
GCCTGGCACC AGGACACACC CGAGGCATTG CTGACCGAAG GCGAGCTGCG TGAATGCCTG
GAGCATACGT TGCTCAGCCT CTCCGAACTT CAGAGCAGTG TGCTCACGCT GCGCGAGCGC
CAGGGCCTGG AGCTGGAGGA GATCTGTAAT CTTCTGGAGA TCTCGCTCTC CAATGTCCGC
GTGCTGCTGC ACAGGGCACG TTTGAAGGTC TTTGCGACCG TGGAGCATTT TGAGGAGACG
GGAGAATGTT GA
|
|---|
| Protein sequence | MAVDDTRLLE RLLAGEQKAF KELVSTYQSP MRAVAYAIVG QRHVEEVVQD AWLSVVRNIG
RFEGRSSLKT WLLTITANSA KSRYKLNRRE VLLDDLPSPH GTIDDDRFSP GDGHWLVAPF
AWHQDTPEAL LTEGELRECL EHTLLSLSEL QSSVLTLRER QGLELEEICN LLEISLSNVR
VLLHRARLKV FATVEHFEET GEC
|
|---|
| |