Gene Pfl01_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1404 
Symbol 
ID3717199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1575295 
End bp1576581 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content61% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_347136 
Protein GI77457631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGC CCGACACCCT CGACCTCCCC AAGACTGCGG CCCGTCTCGG CCCGTTCGAC 
TGGTATCGCA ACATCAATCA GCAGGAGCGC CGGACCTTCT GGAGCTGCAA GATCGGCTAC
GGTCTGGACG GCATGGACAC CCAGATGCTC AGCTTCGTGG TGCCGACCCT GATCGCAATG
TGGGGCATCA CCACCGGCGA AGCCGGCCTG ATCCACACCA GCACCCTGAT CGCTTCGGCC
ATCGGCGGTT GGGTGGCGGG AATTCTCTCC GACCGCATCG GCCGCGTGCG CACCCTGCAA
CTGACGGTGC TGTGGTTTGC CTTCTTCACT TTCCTTTGCG GCTTTGCCCA GAACTACGAA
CAGCTGTTGA TTGCCCGCAC CTTGATGGGC TTCGGTTTCG GCGGTGAATG GACCGCCGGT
GCGGTGCTGA TCGGTGAAGT GATCCGGGCC AAGGACCGCG GCAAGGCGGT GGGCATGGTG
CAATCCGGCT GGGCCTTGGG TTGGGGCCTG ACGGCGATTC TGTATGCGCT GCTGTTTTCG
GTGCTGCCAC CGGAAGACGC CTGGCGCGCA CTGTTCATCC TTGGCATCGT GCCGGCGGTG
TTCGTGATTT TCGTCCGCCG TCTGGTGAAA GATCCGGAGA TCTACCGCGA AGCCAAGGCC
AGACAAACCC CGGAAAGCCC TTCGAAGTTC TACGAGATTT TCGCCCCCGG CATGCTCTTC
ACCACGATTC GTGCCTCGCT GCTGACCACC GGCGCCCTCG GCGGTTATTA CGCGATTACC
TCCTGGCTGC CGACTTTTCT GAAAAACGAA CGCGGTTTGA GCGTACTCGG CACCGGCGGT
TATCTGGCGA TGGTGATCAT CGGTTCCTAC GCCGGTTATG TGATCAGCGC CTATTTGACC
GACCTGTTGG GCCGCAAGAA GAACTTCATC CTGTTCGCCG TCGGCTCGTT CACCATCGTT
CTGCTCTACA CCCAATTGCC GGTCAGCAAC GGCGTGATGC TGTGGCTGGG TTTCCCGCTG
GGCTTTTTCG CCTCGGGGAT TTTCAGTGGG ATGGGCGCGT TTCTCACCGA GTTGTTTCCA
ACCCGGATTC GTGGCTCGGG GCAGGGCTTC TGCTACAACA TCGGTCGGGC GCTGGCGGCT
TTGTTCCCGC TGCTGATCGG CCTGCTCAGT CAGAAGGTGC CACTGAGCGT AGGCATCGGT
GCCTTTGCGG CGGTGTCCTA CGGGGTGGTG ATCCTCGCGG CGTTGAGCCT GCCGGAAACC
CGTGGCAAGC AACTGGACGC GCAGTAA
 
Protein sequence
MSAPDTLDLP KTAARLGPFD WYRNINQQER RTFWSCKIGY GLDGMDTQML SFVVPTLIAM 
WGITTGEAGL IHTSTLIASA IGGWVAGILS DRIGRVRTLQ LTVLWFAFFT FLCGFAQNYE
QLLIARTLMG FGFGGEWTAG AVLIGEVIRA KDRGKAVGMV QSGWALGWGL TAILYALLFS
VLPPEDAWRA LFILGIVPAV FVIFVRRLVK DPEIYREAKA RQTPESPSKF YEIFAPGMLF
TTIRASLLTT GALGGYYAIT SWLPTFLKNE RGLSVLGTGG YLAMVIIGSY AGYVISAYLT
DLLGRKKNFI LFAVGSFTIV LLYTQLPVSN GVMLWLGFPL GFFASGIFSG MGAFLTELFP
TRIRGSGQGF CYNIGRALAA LFPLLIGLLS QKVPLSVGIG AFAAVSYGVV ILAALSLPET
RGKQLDAQ