Gene Pfl01_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1403 
Symbol 
ID3717198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1574237 
End bp1575148 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content61% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_347135 
Protein GI77457630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.311386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA AGTTTCTCGA AACGTTCGTC TGGGTCGCCC GGCTGAAAAG TTTTCGCCTG 
ACCGCCGACA AGCTGTTCAC CACTCAGGCC TCGATCTCAA GCCGGATCGC GGTGCTCGAA
GGCGAGCTCG GGGTGAAGCT GTTCCTGCGT GATTCACGCG GCGTCAGCCT GACGCCCGAA
GGTTTGAAAG TGCTGGACTA TGCCGAGCAG ATGCTCGACA CGATGCAGGC GCTGAAGCAG
TCGATCGAGA CCCGATCGAG CAAGGTCGGC CGGGTGCGCA TCGGGGTGAT GGACACGGTG
ATCCACACCT GGCTCAGCCC GCTGGTGGCG CAGATGACCG ATCTGTACCC ACGGGTGGAA
ATCGAGCTGG TGGCGGATAC CTCGCTGAAC CTCTGCGATC AGCTGCAAAA AGGCTTTCTC
GATCTGATCC TGCAAACCGA TCTGGTGCGC CAGGAAAGCG TGCGCAGCCT GGAGCTGGCC
AGCCACCCCA TCGGCTGGAT CGTCGCCAGC AACTCGATCT ACAACCGCGA TTACCAGAGC
CTCGCCGACC TGGCCCAGGA ACGGATCATC ACCTACTCGA AAAACTCCCG GCCGCACCAG
GACATCCTGG CGTTGATGCA GGCCCAAGGT GTGTTGGCGC CACGGTTGAA CTGTGTGAAT
TCGGTATCGG CGATTACCCG GCTGTTACGC GACGGGTTCG GCATTGGCGC GTTGCCGCCG
GTGCTGGTGG CCGAGGAGCT GACGCGGGGC GAACTGACCC TGCTCGACAT CGAACAGCGC
CCGCCGAACC TCCAGGTCGT GGTGTCGTGG CGGGTCGGCG TGGAATGGGT CGAGGAAATT
GTGACGCTGT GTCAGCAGGT GCTGGAGGGG TATACGCGCA AGGTGGGCAA GGATTACATC
GCTTTAAGTT GA
 
Protein sequence
MNLKFLETFV WVARLKSFRL TADKLFTTQA SISSRIAVLE GELGVKLFLR DSRGVSLTPE 
GLKVLDYAEQ MLDTMQALKQ SIETRSSKVG RVRIGVMDTV IHTWLSPLVA QMTDLYPRVE
IELVADTSLN LCDQLQKGFL DLILQTDLVR QESVRSLELA SHPIGWIVAS NSIYNRDYQS
LADLAQERII TYSKNSRPHQ DILALMQAQG VLAPRLNCVN SVSAITRLLR DGFGIGALPP
VLVAEELTRG ELTLLDIEQR PPNLQVVVSW RVGVEWVEEI VTLCQQVLEG YTRKVGKDYI
ALS