Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1403 |
Symbol | |
ID | 3717198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1574237 |
End bp | 1575148 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_347135 |
Protein GI | 77457630 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.311386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGA AGTTTCTCGA AACGTTCGTC TGGGTCGCCC GGCTGAAAAG TTTTCGCCTG ACCGCCGACA AGCTGTTCAC CACTCAGGCC TCGATCTCAA GCCGGATCGC GGTGCTCGAA GGCGAGCTCG GGGTGAAGCT GTTCCTGCGT GATTCACGCG GCGTCAGCCT GACGCCCGAA GGTTTGAAAG TGCTGGACTA TGCCGAGCAG ATGCTCGACA CGATGCAGGC GCTGAAGCAG TCGATCGAGA CCCGATCGAG CAAGGTCGGC CGGGTGCGCA TCGGGGTGAT GGACACGGTG ATCCACACCT GGCTCAGCCC GCTGGTGGCG CAGATGACCG ATCTGTACCC ACGGGTGGAA ATCGAGCTGG TGGCGGATAC CTCGCTGAAC CTCTGCGATC AGCTGCAAAA AGGCTTTCTC GATCTGATCC TGCAAACCGA TCTGGTGCGC CAGGAAAGCG TGCGCAGCCT GGAGCTGGCC AGCCACCCCA TCGGCTGGAT CGTCGCCAGC AACTCGATCT ACAACCGCGA TTACCAGAGC CTCGCCGACC TGGCCCAGGA ACGGATCATC ACCTACTCGA AAAACTCCCG GCCGCACCAG GACATCCTGG CGTTGATGCA GGCCCAAGGT GTGTTGGCGC CACGGTTGAA CTGTGTGAAT TCGGTATCGG CGATTACCCG GCTGTTACGC GACGGGTTCG GCATTGGCGC GTTGCCGCCG GTGCTGGTGG CCGAGGAGCT GACGCGGGGC GAACTGACCC TGCTCGACAT CGAACAGCGC CCGCCGAACC TCCAGGTCGT GGTGTCGTGG CGGGTCGGCG TGGAATGGGT CGAGGAAATT GTGACGCTGT GTCAGCAGGT GCTGGAGGGG TATACGCGCA AGGTGGGCAA GGATTACATC GCTTTAAGTT GA
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Protein sequence | MNLKFLETFV WVARLKSFRL TADKLFTTQA SISSRIAVLE GELGVKLFLR DSRGVSLTPE GLKVLDYAEQ MLDTMQALKQ SIETRSSKVG RVRIGVMDTV IHTWLSPLVA QMTDLYPRVE IELVADTSLN LCDQLQKGFL DLILQTDLVR QESVRSLELA SHPIGWIVAS NSIYNRDYQS LADLAQERII TYSKNSRPHQ DILALMQAQG VLAPRLNCVN SVSAITRLLR DGFGIGALPP VLVAEELTRG ELTLLDIEQR PPNLQVVVSW RVGVEWVEEI VTLCQQVLEG YTRKVGKDYI ALS
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