| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1399 |
|---|
| Symbol | |
|---|
| ID | 3717194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1570199 |
|---|
| End bp | 1572253 |
|---|
| Gene Length | 2055 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | oligopeptidase B |
|---|
| Protein accession | YP_347131 |
|---|
| Protein GI | 77457626 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.357658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTAT CCGCCAACGT CATCAGCGCC CCGATTGCCC ACAAGGCCGC CGGTCACGAC
CCGTACGCCT GGCTGCAGGA ACGCGACACC GACGCGGTGC TCGACTACCT CAAGGCTGAA
AACGACTATC AGCAGGCGCA GACCGCCGAT CAGGCCGAAC TGCGTGAAAC CCTGTTCGAA
GAGATCAAGG GCCGGATCCT CGAAACCGAC CTGTCGCTGC CATCGCCATG GGGCCCGTAC
CTGTATTACA CCCGCACCAC AGCGGGTGAC GAATACGCCC GCCACTACCG CTGCCCGCGT
CCGGCCGACG ACAGCCTGAC CCTCGACGAA AGCCGCGAAC AATTGCTGCT CGACCCGAAC
GCCCTGGCCA ATGGCGGCTT TTTCTCCCTG GGCGCGTTCA GCATCAGCCC GGATCACCAG
CGTCTGGCCT ACAGCGTCGA TGCCTCGGGC GACGAGATTT ACACGCTGTT CGTGAAGGAA
TTGTCCAGCG AGCGCGTCAG CGAACTGGAA TTCCAGGACT GCGACGGCAG CATGACCTGG
GCCAACGACA GCCTCACGCT GTTCTTCGGC GTGCTCGACG ACACCCACCG CCCGCACAAA
CTGTTCCGCT ACCGCCTGGA CGGCACCGCC GCCGAAGAGG TGTTCCACGA GCCGGACGGG
CGTTTCTTCC TGCATTGCTA CCGCGCCAGC TCCGAGCAGC AATTGCTGTT GTCCCTGGGC
AGCAAGACCA CCAGCGAAGT CTGGGCGCTG GATGCCAATC AGCCGCAGCA GCCATTCACT
TGCCTGGCGC CACGGGTCGA GGATCACGAG TACGACGTCG ATCACGGCAA GCTCGATGGC
GAATGGACCT GGTTCATCCG CACCAACCGC GACGGCATCA ACTTCGCCCT GTATCAGGCG
CCGGACACCG GTATTGCACC GAGCGAAGCC GACTGGCAGA ACCTGATTCC GCACAGTGAT
TCGGTGATGC TCGATGGCGT GACCCTCAAC GCCGAAGCCC TGACCCTGAG CCTGCGCGAG
GGTGGTCTGC CAATCATCGA AGTTCGACCA CACGGTCTGG CGCCTTATCG CGTGCAACTA
CCGGACGCGG CCTACAGCCT CTACGTGCAA AACAGCCTGG AATTCGAAAG TGACCGCATT
CGCCTGCGCT ATGAAGCGCT GAATCGTCCG GCTCAGGTTC GGCAACTGAT CCTCGCCACC
GGCGAGCAGA CTGTGCTCAA GGAAACCCCG GTGCTCGGCC CGTTCGACGC CGACGCCTAC
GTCAGCCAGC GCCTGTGGGC GACCGCGCCG GACGGCACCC AGGTGCCGAT CAGTCTGGTG
ATGAAACGGG AAATGGTCGG CAAAGCGGTG CCGCTGTACC TGTACGGTTA CGGCGCCTAC
GGCTCAAGCC TCGACCCGTG GTTCTCCCAC GCCCGCCTGA GTCTGCTGGA TCGCGGCATG
GCGTTCGCCA TCGCCCATGT GCGCGGCGGC GGTGAACTGG GCGAAGCCTG GTACCGCGCC
GGCAAGCAGG AGCACAAGCA CAACACGTTC AGCGACTTCA TTGCCTGCGC CGAATTCCTG
ATCCTCAACG GCATCACCAC CGCGCCACAG CTGGCGATCA GTGGCGGCAG CGCTGGTGGT
TTGCTGATCG GTGCGGTGCT CAACCAGCGT CCGGATCTGT TCGGTGTGGC GATTGCCGAA
GTGCCGTTCG TCGACGTGCT CAATACCATG CTCGACCCGG ACCTGCCGCT GACCGTCACT
GAATACGACG AGTGGGGCAA TCCCGAAGAG CCGGAGGTCT ACGAGCGGAT CAAGGCCTAC
GCGCCGTACG AAAACGTCAC CGCGCAGGCC TATCCCGCAA CGTTGGTGAT CGCCGGCTAC
AACGACAGCC GCGTGCAGTA TTGGGAAGCG GCCAAGTGGG TGGCGAAATT GCGCGCGACC
AAGACCGATG ACAATCCGCT GCTGCTCAAG ACTGAACTGG GCGCCGGCCA CGGTGGCATG
AGCGGGCGTT ATCAGGGATT ACGTGACGTA GCGCTCGAAT ATGCATTTGT TTTCAAGGTT
CTGGGCATTG TCTGA
|
|---|
| Protein sequence | MPVSANVISA PIAHKAAGHD PYAWLQERDT DAVLDYLKAE NDYQQAQTAD QAELRETLFE
EIKGRILETD LSLPSPWGPY LYYTRTTAGD EYARHYRCPR PADDSLTLDE SREQLLLDPN
ALANGGFFSL GAFSISPDHQ RLAYSVDASG DEIYTLFVKE LSSERVSELE FQDCDGSMTW
ANDSLTLFFG VLDDTHRPHK LFRYRLDGTA AEEVFHEPDG RFFLHCYRAS SEQQLLLSLG
SKTTSEVWAL DANQPQQPFT CLAPRVEDHE YDVDHGKLDG EWTWFIRTNR DGINFALYQA
PDTGIAPSEA DWQNLIPHSD SVMLDGVTLN AEALTLSLRE GGLPIIEVRP HGLAPYRVQL
PDAAYSLYVQ NSLEFESDRI RLRYEALNRP AQVRQLILAT GEQTVLKETP VLGPFDADAY
VSQRLWATAP DGTQVPISLV MKREMVGKAV PLYLYGYGAY GSSLDPWFSH ARLSLLDRGM
AFAIAHVRGG GELGEAWYRA GKQEHKHNTF SDFIACAEFL ILNGITTAPQ LAISGGSAGG
LLIGAVLNQR PDLFGVAIAE VPFVDVLNTM LDPDLPLTVT EYDEWGNPEE PEVYERIKAY
APYENVTAQA YPATLVIAGY NDSRVQYWEA AKWVAKLRAT KTDDNPLLLK TELGAGHGGM
SGRYQGLRDV ALEYAFVFKV LGIV
|
|---|
| |