Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1395 |
Symbol | |
ID | 3717190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1567581 |
End bp | 1568117 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_347127 |
Protein GI | 77457622 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.502759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGTT CCACCCTCCC CCAATCCCCG TATAATCGCC CTCTTTTTCC CGAAGGCACC CCGCTCGTGG CAGACAAACG GTACAGCTGC ATTGGTTTGT ATAACCCCAA ATCACCGGAA AACGTCGGTT CGGTGATGCG CGCCGCAGGC TGCTACGGCG TGTCGACCGT GTTCTATACC GGCAAGCGCT ATGAACGCGC CGCCGACTTC GTCACCGACA CCAAGCGCGT GCACTACGAC ATCCCGCTGA TCGGCATCGA CGACCTGAAA AAGATCCTGC CGCTCAATTG CGTCCCGGTC GCCGTGGAAC TGGTCGATGG CGCCCGCCCG CTGCCGGAAT ACACCCACCC GGATCGCGCC CTGTACATCT TCGGCCCCGA AGACGGCTCG CTGGATCAGG AGATCCGCGA CTGGTGCGAA GACGTCGTGT ACATCCCGAC CACCGGCTGC ATGAACCTCG CCGCCACGGT CAACGTTGTG CTCTACGACC GCATGGCCAA AGGCCTGAAT ACCCGCTCCG GACCGAAATT CCGCTGA
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Protein sequence | MIGSTLPQSP YNRPLFPEGT PLVADKRYSC IGLYNPKSPE NVGSVMRAAG CYGVSTVFYT GKRYERAADF VTDTKRVHYD IPLIGIDDLK KILPLNCVPV AVELVDGARP LPEYTHPDRA LYIFGPEDGS LDQEIRDWCE DVVYIPTTGC MNLAATVNVV LYDRMAKGLN TRSGPKFR
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