Gene Pfl01_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1395 
Symbol 
ID3717190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1567581 
End bp1568117 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content61% 
IMG OID 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_347127 
Protein GI77457622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.502759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGTT CCACCCTCCC CCAATCCCCG TATAATCGCC CTCTTTTTCC CGAAGGCACC 
CCGCTCGTGG CAGACAAACG GTACAGCTGC ATTGGTTTGT ATAACCCCAA ATCACCGGAA
AACGTCGGTT CGGTGATGCG CGCCGCAGGC TGCTACGGCG TGTCGACCGT GTTCTATACC
GGCAAGCGCT ATGAACGCGC CGCCGACTTC GTCACCGACA CCAAGCGCGT GCACTACGAC
ATCCCGCTGA TCGGCATCGA CGACCTGAAA AAGATCCTGC CGCTCAATTG CGTCCCGGTC
GCCGTGGAAC TGGTCGATGG CGCCCGCCCG CTGCCGGAAT ACACCCACCC GGATCGCGCC
CTGTACATCT TCGGCCCCGA AGACGGCTCG CTGGATCAGG AGATCCGCGA CTGGTGCGAA
GACGTCGTGT ACATCCCGAC CACCGGCTGC ATGAACCTCG CCGCCACGGT CAACGTTGTG
CTCTACGACC GCATGGCCAA AGGCCTGAAT ACCCGCTCCG GACCGAAATT CCGCTGA
 
Protein sequence
MIGSTLPQSP YNRPLFPEGT PLVADKRYSC IGLYNPKSPE NVGSVMRAAG CYGVSTVFYT 
GKRYERAADF VTDTKRVHYD IPLIGIDDLK KILPLNCVPV AVELVDGARP LPEYTHPDRA
LYIFGPEDGS LDQEIRDWCE DVVYIPTTGC MNLAATVNVV LYDRMAKGLN TRSGPKFR