Gene Pfl01_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1390 
Symbol 
ID3717223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1563497 
End bp1564429 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content65% 
IMG OID 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_347122 
Protein GI77457617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTC TGATTGCTGA ACACGACCAC GCGATATACG CCCGACTGCT GCGTCAGGCG 
GCCCCGGAGC TTGAAGTACT GACCAGCGGC GACTCCGCCG AACTGGCCCG CCAGGCCGTC
GATTGCCCGG TGTGGCTGGG CCAGCCGGAT CTGCTGGCGA CCCTTTTGCG TCAGGGTCAT
CAGCCCCAAT GGCTGCAATC GACCTGGGCC GGGATCACGC CGCTGCTGGC CGACGGCCTG
CGCCGGGATT ACCGCCTGAC CCGGGCGGTC GGCATTTTCG GCCAGGTCAT GGCTGAATAC
GTGCTGACCT ACATGCTCGG CCACGAACGC GAAGTACTGG CGCGGCTGGT CAGCCAGGTC
GAGCGCAAGT GGGACAACCG CACCGGCCAG AGTCTGGTCG GGCGCAAGGT GCTGATCGTC
GGCACCGGTG ACATCGGCCA GAGCGTGGCG CAGTTCCTGC TGCCGTTCGG CGTCGAGTTG
TACGGCATCG CCAGCAGCGC TCGCGAGCAG GCGCCGTTTG TCGAAGTCGG TTCGATGGCG
GACTTGCCGC GTCTGGTGGG CGAGGCGGAT TACGTGGTCA ACCTGCTGCC CAACACCGAG
CACACCCACG ACATTTACGA TGCGGCGCTG TTCAAGCAAT TCAAGCCGAC CGGGTTGTTC
ATCAACGCCG GACGCGGTGT CGCAGTGGTC GATGCGGATC TGGTCGAAGC GTTGAAGGAA
GGTCATCTGG CGGGCGCGGT GATCGACGTC TGCCGTCAGG AACCGTTGCC GCAACGGCAT
CCGTTCTGGA CTGCATGGGG CTTGTTGCTG ACCGGGCACA GCTCGGCGCC GACCTCGCCG
CCGATGATGG TGCAGTTGTT TCTGGATAAC GTGCGGGCGT ATCAGGCGGG CGAAGCGTTG
CGCGGGGAAG TGGATTTCGC ACGCGGTTAC TGA
 
Protein sequence
MRVLIAEHDH AIYARLLRQA APELEVLTSG DSAELARQAV DCPVWLGQPD LLATLLRQGH 
QPQWLQSTWA GITPLLADGL RRDYRLTRAV GIFGQVMAEY VLTYMLGHER EVLARLVSQV
ERKWDNRTGQ SLVGRKVLIV GTGDIGQSVA QFLLPFGVEL YGIASSAREQ APFVEVGSMA
DLPRLVGEAD YVVNLLPNTE HTHDIYDAAL FKQFKPTGLF INAGRGVAVV DADLVEALKE
GHLAGAVIDV CRQEPLPQRH PFWTAWGLLL TGHSSAPTSP PMMVQLFLDN VRAYQAGEAL
RGEVDFARGY