Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1386 |
Symbol | |
ID | 3717219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1558705 |
End bp | 1559889 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_347118 |
Protein GI | 77457613 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAACG TACGCGCCAC TGCCCGCCCC GCTGTCTGGC TGATACTCGG CATCATCCTG GTCGCCCTCA ACCTGCGCCC GTCGATGGCG GCGGTCGGGC CCTTGCTCTC GGCCATTCGC GGCGATATGG CGCTGAGTTT CAGTCTCGCG GCATTGCTGA CCCTGCTGCC GGTGATGGCG ATGGGGCTGG CGATGTTTTT CGGCATGGAG GTCAGTCGGC GCCTCGGTGA ACAGCGCACG GTACTGCTGT CGTTGCTGAT CATTGGCTTG GCGACGCTGT CACGGTTGTT TCTCGACTCG GCGGGCGGAT TGATCGCCAG CGCCGTGCTG GCCGGGATCG GCATTGCCCT GATCCAGGCC TTGATGCCCG CGCTGATCAA ATCGCGGTTT CCCGACAACG TGGCGCTGTG CATGGGGCTT TACGTCACTT CGATCATGGG CGGCGCGGCA CTGGCCGCAT CGTTCGCACC GTGGGTGTTG ATGCAAACCG GTAACTGGCG GGCAGGGCTT GCCGTCTGGG CGGTTTTGGC ACTGCTCGCC ATTCCTGTGT GGTGGGCAAC CCGTGCCACA CCACCGGACA CCACCCGGGC CGTCGTCAGA AAAGAATCCT TCATCACGAA TTCCCGCGCC TGGTTGCTCG CGATCTTCTT CGGTCTGGGC ACCGCGTCCT ACACCTGCGT GCTCGCCTGG CTGGCGCCGT ACTACGTGGA AAAGGGCTGG AACGAACAAA ACGCCGGCCT GATGCTGGGT TTTCTGACGG CCATGGAGGT GATTTCCGGG CTGGTGGTGC CGGCCATCGC CAATCGCAGC CGTGACCGAC GTCTGGTGCT TGGGGCACTG CTCGGCCTGA TCATCACCGG GTTCCTGGGG CTGATCCTCT GCCCGCAGCA CCTGAGCCTG TTGTGGCCCT GCCTGCTCGG ACTCGGCATC GGCGGGTTGT TCCCGATGAG CCTGATCGTG TCCCTCGATC ACCTCGACGA ACCACAACGT GCCGGCGGGC TGACCGCGTT CGTACAAGGT ATCGGTTACC TGATTGCCGG GCTGTCGCCG CTGATGGCCG GGGTGGTTCG CGATCGACTG GGCAGCTTCG AGTGGGCCTG GTGGTCACTG ACGGCAGTGA TGGTGCTTAT GCTGCTGATG GTGCTGCGCT TCAACCCACG GCATTACGCG CAACACATGG ACTAA
|
Protein sequence | MENVRATARP AVWLILGIIL VALNLRPSMA AVGPLLSAIR GDMALSFSLA ALLTLLPVMA MGLAMFFGME VSRRLGEQRT VLLSLLIIGL ATLSRLFLDS AGGLIASAVL AGIGIALIQA LMPALIKSRF PDNVALCMGL YVTSIMGGAA LAASFAPWVL MQTGNWRAGL AVWAVLALLA IPVWWATRAT PPDTTRAVVR KESFITNSRA WLLAIFFGLG TASYTCVLAW LAPYYVEKGW NEQNAGLMLG FLTAMEVISG LVVPAIANRS RDRRLVLGAL LGLIITGFLG LILCPQHLSL LWPCLLGLGI GGLFPMSLIV SLDHLDEPQR AGGLTAFVQG IGYLIAGLSP LMAGVVRDRL GSFEWAWWSL TAVMVLMLLM VLRFNPRHYA QHMD
|
| |