Gene Pfl01_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1386 
Symbol 
ID3717219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1558705 
End bp1559889 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content63% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_347118 
Protein GI77457613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG TACGCGCCAC TGCCCGCCCC GCTGTCTGGC TGATACTCGG CATCATCCTG 
GTCGCCCTCA ACCTGCGCCC GTCGATGGCG GCGGTCGGGC CCTTGCTCTC GGCCATTCGC
GGCGATATGG CGCTGAGTTT CAGTCTCGCG GCATTGCTGA CCCTGCTGCC GGTGATGGCG
ATGGGGCTGG CGATGTTTTT CGGCATGGAG GTCAGTCGGC GCCTCGGTGA ACAGCGCACG
GTACTGCTGT CGTTGCTGAT CATTGGCTTG GCGACGCTGT CACGGTTGTT TCTCGACTCG
GCGGGCGGAT TGATCGCCAG CGCCGTGCTG GCCGGGATCG GCATTGCCCT GATCCAGGCC
TTGATGCCCG CGCTGATCAA ATCGCGGTTT CCCGACAACG TGGCGCTGTG CATGGGGCTT
TACGTCACTT CGATCATGGG CGGCGCGGCA CTGGCCGCAT CGTTCGCACC GTGGGTGTTG
ATGCAAACCG GTAACTGGCG GGCAGGGCTT GCCGTCTGGG CGGTTTTGGC ACTGCTCGCC
ATTCCTGTGT GGTGGGCAAC CCGTGCCACA CCACCGGACA CCACCCGGGC CGTCGTCAGA
AAAGAATCCT TCATCACGAA TTCCCGCGCC TGGTTGCTCG CGATCTTCTT CGGTCTGGGC
ACCGCGTCCT ACACCTGCGT GCTCGCCTGG CTGGCGCCGT ACTACGTGGA AAAGGGCTGG
AACGAACAAA ACGCCGGCCT GATGCTGGGT TTTCTGACGG CCATGGAGGT GATTTCCGGG
CTGGTGGTGC CGGCCATCGC CAATCGCAGC CGTGACCGAC GTCTGGTGCT TGGGGCACTG
CTCGGCCTGA TCATCACCGG GTTCCTGGGG CTGATCCTCT GCCCGCAGCA CCTGAGCCTG
TTGTGGCCCT GCCTGCTCGG ACTCGGCATC GGCGGGTTGT TCCCGATGAG CCTGATCGTG
TCCCTCGATC ACCTCGACGA ACCACAACGT GCCGGCGGGC TGACCGCGTT CGTACAAGGT
ATCGGTTACC TGATTGCCGG GCTGTCGCCG CTGATGGCCG GGGTGGTTCG CGATCGACTG
GGCAGCTTCG AGTGGGCCTG GTGGTCACTG ACGGCAGTGA TGGTGCTTAT GCTGCTGATG
GTGCTGCGCT TCAACCCACG GCATTACGCG CAACACATGG ACTAA
 
Protein sequence
MENVRATARP AVWLILGIIL VALNLRPSMA AVGPLLSAIR GDMALSFSLA ALLTLLPVMA 
MGLAMFFGME VSRRLGEQRT VLLSLLIIGL ATLSRLFLDS AGGLIASAVL AGIGIALIQA
LMPALIKSRF PDNVALCMGL YVTSIMGGAA LAASFAPWVL MQTGNWRAGL AVWAVLALLA
IPVWWATRAT PPDTTRAVVR KESFITNSRA WLLAIFFGLG TASYTCVLAW LAPYYVEKGW
NEQNAGLMLG FLTAMEVISG LVVPAIANRS RDRRLVLGAL LGLIITGFLG LILCPQHLSL
LWPCLLGLGI GGLFPMSLIV SLDHLDEPQR AGGLTAFVQG IGYLIAGLSP LMAGVVRDRL
GSFEWAWWSL TAVMVLMLLM VLRFNPRHYA QHMD