Gene Pfl01_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1380 
Symbol 
ID3717213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1552958 
End bp1553668 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347112 
Protein GI77457607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA AGGAAACCGA CATCCTCGGC GACAGCATCG GCGAACATTG GTATTACTGC 
TCCAAAGCGG CCGCGACCCG TCGTTTGCTG GGTGAAGCGC CGATCCAACG AATTCTCGAC
GTCGGCGCCG GTTCAGGATT TTTCTCCCAT CATTTGTTGA CCCACACGGC GGCGCGCGAA
GCGTGGTGCG TGGACATCAG CTACCCGGCC GATTCGAGCG CCATCACTGC TGGCAAACCG
GTGCATTACC GCCGGTCCAT CGACACCGTG GACGCTGATC TGGTGTTGCT GATGGATGTA
CTGGAACACG TCGAAGACGA CCTCGGCCTG CTCAAATCGT ACGTCGACAA GGTACCGTCC
GGCAGTCGCT TTCTGATGAC CGTGCCGGCG TTCCAGTTCA TGTGGAGCGG GCACGATGAT
TTTCTCGAAC ACAAACGTCG CTACACCCTG GGGCAATTCG AGGCTCTGGC GGGTGACGCC
GGATTGACGG TGGAGCGGGG CGCCTATTAC TTCGCAGCGG TCTTCCCGCT TGCGCTGGCG
TCGCGCCTGT TACCCGGCGG CGCTCGGGAG GCGGCCCCGC GTTCACAGCT GAAAAAACAT
CATCCGTTGG TCAATACACT GCTCAAAACC CTGTGCAGTC TTGAGTTGCC GTTGATGGGC
ATCAACCGTG TGGGCGGTCT GAGTGTGTTC GTGCTGGCGC GCAAGCCGTG A
 
Protein sequence
MDLKETDILG DSIGEHWYYC SKAAATRRLL GEAPIQRILD VGAGSGFFSH HLLTHTAARE 
AWCVDISYPA DSSAITAGKP VHYRRSIDTV DADLVLLMDV LEHVEDDLGL LKSYVDKVPS
GSRFLMTVPA FQFMWSGHDD FLEHKRRYTL GQFEALAGDA GLTVERGAYY FAAVFPLALA
SRLLPGGARE AAPRSQLKKH HPLVNTLLKT LCSLELPLMG INRVGGLSVF VLARKP