Gene Pfl01_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1379 
Symbol 
ID3717212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1551932 
End bp1552954 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content59% 
IMG OID 
Productglycosyl transferase family protein 
Protein accessionYP_347111 
Protein GI77457606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.603449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGA ACAGCGTTCG GCGACCGACA ATCACTATAA GAAAGAGCAG TCCATTGACC 
CATCCGCACG GAACGCAACA CGCGGGCCCG GTGAAGTTGT CGCTGGTGAT CCCCGTATTC
AATGAAGAGG ACAGCCTCGA CGGTTTTCTC CTGCGCATTC GTCAGGTTTT CGAGCAAGAG
ACGCTGGTCG AACTGGAACT GGTGTTCGTC AATGACGGCA GTTCCGATAC AACGCTGGAG
CGCTTGCTGA ACTGCCAGCA GAGCGACTCG CGCATCCGTA TCGTCGATCT GAGCCGCAAT
TTCGGCAAGG AAGCGGCGCT GTCCGCCGGT TTGCAGACGG CCACCGGGCA AATCGTGGTG
CCGATCGATG TCGATCTGCA GGATCCGCCC GAGGTCATCC TGCAAATGAT CGAGCGCTGG
CGCGAAGGGT TTGAAGTGGT GCTTGGCCAC CGCATCAGTC GGCGCAACGA CTCCTGGGCC
AAGCAGACTT CCGCCGGTTG GTTCTATCGC CTGCACAACA AAATTGCCGA ACAGGCATTA
CCGGAAAACG TCGGTGATTT CCGGCTGATG GATCGCTGCG TGGTCGACGC GCTGCTGACA
CTGCCCGAAT CCCGACGCTT CATGAAAGGC CTGTTCGCCT GGGTCGGATT TCGCACCACC
CAGGTCGAGT ACGAACGCCC GGAGCGGGCA GCGGGGCAGA GCAAGTTCAA TGGCTGGCGG
CTGTGGAATT TCGCCCTGGA GGGCATCACC AGTTTCAGCA CCGAACCGTT GCGGATCTGG
ACGTATCTGG GAGCGCTGGT CTCTCTGGTG TCGTTCGCCT TTGCGATGTT CATTGTGGTG
CGCACGCTGA TCCATGGCGT CGACATGCCC GGTTACGCCT CGCTGATGGT TGCCGTGACG
TTTCTCGGCG GTTTGCAGTT GATTGGCATC GGTGTGCTCG GCGAGTATCT GGGCCGCACT
TATATCGAAG CGAAGCGCCG GCCGGTTTTC CTGGTGCGCC GCATCTACGA ATCCAAGGAC
TGA
 
Protein sequence
MASNSVRRPT ITIRKSSPLT HPHGTQHAGP VKLSLVIPVF NEEDSLDGFL LRIRQVFEQE 
TLVELELVFV NDGSSDTTLE RLLNCQQSDS RIRIVDLSRN FGKEAALSAG LQTATGQIVV
PIDVDLQDPP EVILQMIERW REGFEVVLGH RISRRNDSWA KQTSAGWFYR LHNKIAEQAL
PENVGDFRLM DRCVVDALLT LPESRRFMKG LFAWVGFRTT QVEYERPERA AGQSKFNGWR
LWNFALEGIT SFSTEPLRIW TYLGALVSLV SFAFAMFIVV RTLIHGVDMP GYASLMVAVT
FLGGLQLIGI GVLGEYLGRT YIEAKRRPVF LVRRIYESKD