Gene Pfl01_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1372 
Symbol 
ID3717242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1545210 
End bp1546325 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content61% 
IMG OID 
Productputative lipoprotein 
Protein accessionYP_347104 
Protein GI77457599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.176077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAA TGGCCGGACT TTCCGCACTT GCCTTGATTA TCTCCAGCAC CAGTGGCTGC 
GGATGGATCT GGGGCCCGGA AGGTTATTTC CGTGACCGTG GTAGCGATTA CCTGGAAGCG
CAACAGACTG CACCGATGCA ACTGCCACCG GACGTCAGCA CCTCCAAGCG CCTGGATCCG
CTGCTGCCGA TCCCGCGCAA CGTGGCCGAC GACACCGCCA AGGGTGAATA CATCGTTCCG
CGCCCTCAAC CGCTGTCGAC CGTTGCCGAT GCCAGCGACT ACTCGCTGCA GAAGAGCGGT
GATTCGCGTT GGGTCATGGC CCAGCATCCA CCGGCCGAAG TCTGGCCAGT GGCGGTGCAA
TACTTCCAGG ACAACGGTTT CCGTCTGGAT GAACAGCGTC CGCAAACCGG CGAATTCACC
ACCACCTGGC AGCATTCCGA CGAACTGTCC GCCGCCATGG CCAAGCGTCT GAGCGCCGCC
GGCGTCAGCA CCGACAGCGA AACCCGCGTG CGGGTACGTA TCGAGCCAGG CGTGCAGCGC
AACACCAGTG AAGTCTATGT GGTCAGCGCC GAGCGTCCTG CCGGCAGCAC TGCCAATGTC
GATTTCACCA ACCGTTCGGT CAACACCGGT CTCGACGCCG CGCTGGTCGA CGACATGCTC
GCGAGCATGA GCCGTACCTC CGAGAAGGGT GGTTCGGTAT CGATGCTGGC TTCGCGTGAT
TTCGACACCC CGAGCCGTGT CAGCCTGAGC GAAGACGGCA GCGGCAACCC GGTACTGAAC
GTCGGTACGG ACCTGGATCG TGCCTGGTCG AGCGTCGGTC GTGCGCTGGA ACAGGGCGAA
TGGCGCGTTG AAGACATCAA CCGCAGCCTG GGTCTCTACT ACATCAACTT GTCCGAAAAG
GCCGAGAAGA AAGACGAGAA ACCTGGTTTC TTCAGCAGCC TGTTCGGCAG CGCGCCGACC
AAGGAAGAAG TTGAAGCTCG CGCCGAGCGT TATCAGGTTC GCCTGAGCAA GGTCGGCGAG
AACGTTCAGG TCACCGTCGA GAAAAACATC AACACCGTTG CGCCGGCCGA TGTGGCCCGC
AAAGTGTTGA GCGTGATTCA GGACAACCTG GGCTGA
 
Protein sequence
MKRMAGLSAL ALIISSTSGC GWIWGPEGYF RDRGSDYLEA QQTAPMQLPP DVSTSKRLDP 
LLPIPRNVAD DTAKGEYIVP RPQPLSTVAD ASDYSLQKSG DSRWVMAQHP PAEVWPVAVQ
YFQDNGFRLD EQRPQTGEFT TTWQHSDELS AAMAKRLSAA GVSTDSETRV RVRIEPGVQR
NTSEVYVVSA ERPAGSTANV DFTNRSVNTG LDAALVDDML ASMSRTSEKG GSVSMLASRD
FDTPSRVSLS EDGSGNPVLN VGTDLDRAWS SVGRALEQGE WRVEDINRSL GLYYINLSEK
AEKKDEKPGF FSSLFGSAPT KEEVEARAER YQVRLSKVGE NVQVTVEKNI NTVAPADVAR
KVLSVIQDNL G