Gene Pfl01_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1365 
Symbol 
ID3717235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1538520 
End bp1539968 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content59% 
IMG OID 
Productpeptidase S1C, Do 
Protein accessionYP_347097 
Protein GI77457592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0859447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAC CAAGCTTGAA GTCTTATCTC TCCATTTTCG CCACGGTGCT GGTGCTCGGT 
CAGGCTGTTC CTGCAGTCCA TGCGGCTGAG GCGGCCAGCC CGGCCAACCT GCCGGATTTC
ACCCAGCTGG TCGAACAGGC CTCGCCTGCG GTGGTGAACA TCAGTACCAC GCAAAAGCTG
CCGGATCGCA AAGTGAACCA GCAAATGCCC GACCTGGAAG GCTTGCCGCC GATGCTGCGC
GAGTTCTTCG AGCGCGGCAT GCCGCCGCAA CAGCGTTCTC CGCGTGGTGA TCGCCAGCGT
GAAGCGCAGT CGCTGGGGTC GGGCTTTATC ATTTCGCCGG ATGGCTACAT CCTGACCAAT
AACCATGTGA TCGCCGATGC CGACGAAATC CTCGTCCGTC TGGCTGATCG CAGTGAAATG
AAAGCCAAGC TGATCGGCAC CGACCCACGC TCCGACGTGG CGCTGCTGAA AATCGAAGGC
AAGGATCTGC CAGTGCTGAA ACTCGGCAAA TCCCAGGACC TGAAAGCCGG TCAATGGGTG
GTGGCAATCG GTTCGCCATT CGGCTTTGAT CACACCGTGA CTCAAGGCAT CGTCAGTGCC
GTCGGTCGCA GCCTGCCGAA TGAAAACTAC GTGCCGTTCA TCCAGACCGA CGTACCGATC
AACCCGGGTA ACTCCGGTGG CCCGCTGTTC AATCTGAACG GTGAAGTGGT CGGGATCAAC
TCGCAGATCT ACACCCGTTC CGGTGGCTTC ATGGGCGTGT CGTTCGCCAT TCCGATCGAC
GTGGCAATGG ACGTTTCCAA TCAGCTGAAA AGCGGCGGCA AAGTCAGCCG TGGCTGGTTG
GGCGTTGTCA TCCAGGAAGT GAACAAGGAT CTGGCCGAGT CGTTCGGTCT GGATAAACCG
GCCGGTGCAC TGGTCGCACA GATTCAGGAT GACGGCCCGG CTGCAAAGGG CGGCCTGCAA
GTGGGTGACG TGATCCTGAG CATGAACGGT CAACCGATCG TCATGTCTGC TGACCTGCCA
CATCTGGTGG GTGCGTTGAA GGCTGGCGCC AAGGCCAACC TCGAAGTGAT TCGTGACGGC
AAGCGCAAGA ATGTCGAGCT GACTGTCGGC GCCATTCCAG ATGAAGACAA GGAACTGGAT
GCTCTGCCGA AATCTGGTGC TGAAACCAAC AGCAATCGTC TGGGGGTATC GGTTGCCGAG
CTGAGCGCCG AGCAGAAGAA AACCTACGAC CTCAAAGGTG GTGTGGTGAT CAAGGAAGTG
CAGGACGGTC CTGCAGCCCT GATCGGTCTG CAACCGGGCG ACATCATCAC CCACCTGAAC
AATCAGGCCA TCGGTTCTTC CAAGGAGTTC GCCGAGATCG CCAAGGCGCT GCCGAAGAAC
CGTTCGGTGT CGATGCGCGT TCTGCGTCAG GGGCGTGCCA GCTTCATCAC GTTCAAACTG
GCTGAATGA
 
Protein sequence
MSIPSLKSYL SIFATVLVLG QAVPAVHAAE AASPANLPDF TQLVEQASPA VVNISTTQKL 
PDRKVNQQMP DLEGLPPMLR EFFERGMPPQ QRSPRGDRQR EAQSLGSGFI ISPDGYILTN
NHVIADADEI LVRLADRSEM KAKLIGTDPR SDVALLKIEG KDLPVLKLGK SQDLKAGQWV
VAIGSPFGFD HTVTQGIVSA VGRSLPNENY VPFIQTDVPI NPGNSGGPLF NLNGEVVGIN
SQIYTRSGGF MGVSFAIPID VAMDVSNQLK SGGKVSRGWL GVVIQEVNKD LAESFGLDKP
AGALVAQIQD DGPAAKGGLQ VGDVILSMNG QPIVMSADLP HLVGALKAGA KANLEVIRDG
KRKNVELTVG AIPDEDKELD ALPKSGAETN SNRLGVSVAE LSAEQKKTYD LKGGVVIKEV
QDGPAALIGL QPGDIITHLN NQAIGSSKEF AEIAKALPKN RSVSMRVLRQ GRASFITFKL
AE