Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1364 |
Symbol | |
ID | 3717234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1537351 |
End bp | 1538313 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | sigma-E regulatory protein, MucB/RseB |
Protein accession | YP_347096 |
Protein GI | 77457591 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00590877 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCA TACCTCTACT TTCGCTTCTG CTCAGCGGCT GGTTCATTGT TCCAGCCCAC GCCGACGAGG CTCAGGACTG GTTGACCCGC CTGGGCCAGG CCGAGCAGCA GCAAAGCTTT CACGGCACAT TCGTTTACGA GCGTAACGGT AGCTTTTCTA CCCACAACAT CTGGCATCGC GTACAGAATG GCCAGGTCCG CGAGCGTTTG CTTCAGCTCG ACGGTTCGGC TCAGGAAGTC GTGCGCATTG ATGGACATAC TCAATGCGTC AGCGGCACTC TGATTGCGGG GCTTGGGGAT TCTCCCAATT CCGCCGCTCG CCCTCTCGAT CCCCAAAAGC TGAAGAACTG GTATGAGCTT GCCGTCATTG GCAAGTCACG TGTGGCAGGA CGCGAAGCGG TGATCGTATC GCTGACGCCC CGTGATCAGC ACCGCTACGG CTTCGAACTG CATCTGGACA AGGAAACGGG TCTGCCGCTC AAGTCGCTGC TGTTGAACGA CAAGGGGCAG TTGCTTGAGA GGTTCCAGTT CACGCGGCTG GATACTTCTG AAATTCCGTC CGATAAAGAC CTGCAAGCCA ACTCCGATTG CAAGACAGTC ACTCTCGACA GCGACAAGGC TTCTGCGGTC AAGACCGCAC AGGTCTGGCG TTCTGACTGG CTGCCTCCTG GCTTCGAACT CACCAGTAGT TCCTCGCACA AGGATCCGGA AACCAAGACC CAGGTCAACA GCCTGATGTA TGACGATGGT CTTGCCCGCT TCTCTGTTTT CCTGGAGCCG CTGAATGGCG CAACCGTCAC CGATACCCGA ACTCAACTGG GCCCGACCGT TGCCGTATCC CGTCGTTTGA CTACGCCTCA AGGCGAAATG ATGGTGACGG TCGTCGGCGA GATTCCAATC GGGACCGCCG AACGGATTGC CCTGTCGATG CGCAATGATG GCGCTGCAAC CAGCAAGCAG TGA
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Protein sequence | MRAIPLLSLL LSGWFIVPAH ADEAQDWLTR LGQAEQQQSF HGTFVYERNG SFSTHNIWHR VQNGQVRERL LQLDGSAQEV VRIDGHTQCV SGTLIAGLGD SPNSAARPLD PQKLKNWYEL AVIGKSRVAG REAVIVSLTP RDQHRYGFEL HLDKETGLPL KSLLLNDKGQ LLERFQFTRL DTSEIPSDKD LQANSDCKTV TLDSDKASAV KTAQVWRSDW LPPGFELTSS SSHKDPETKT QVNSLMYDDG LARFSVFLEP LNGATVTDTR TQLGPTVAVS RRLTTPQGEM MVTVVGEIPI GTAERIALSM RNDGAATSKQ
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