Gene Pfl01_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1364 
Symbol 
ID3717234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1537351 
End bp1538313 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content58% 
IMG OID 
Productsigma-E regulatory protein, MucB/RseB 
Protein accessionYP_347096 
Protein GI77457591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00590877 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCA TACCTCTACT TTCGCTTCTG CTCAGCGGCT GGTTCATTGT TCCAGCCCAC 
GCCGACGAGG CTCAGGACTG GTTGACCCGC CTGGGCCAGG CCGAGCAGCA GCAAAGCTTT
CACGGCACAT TCGTTTACGA GCGTAACGGT AGCTTTTCTA CCCACAACAT CTGGCATCGC
GTACAGAATG GCCAGGTCCG CGAGCGTTTG CTTCAGCTCG ACGGTTCGGC TCAGGAAGTC
GTGCGCATTG ATGGACATAC TCAATGCGTC AGCGGCACTC TGATTGCGGG GCTTGGGGAT
TCTCCCAATT CCGCCGCTCG CCCTCTCGAT CCCCAAAAGC TGAAGAACTG GTATGAGCTT
GCCGTCATTG GCAAGTCACG TGTGGCAGGA CGCGAAGCGG TGATCGTATC GCTGACGCCC
CGTGATCAGC ACCGCTACGG CTTCGAACTG CATCTGGACA AGGAAACGGG TCTGCCGCTC
AAGTCGCTGC TGTTGAACGA CAAGGGGCAG TTGCTTGAGA GGTTCCAGTT CACGCGGCTG
GATACTTCTG AAATTCCGTC CGATAAAGAC CTGCAAGCCA ACTCCGATTG CAAGACAGTC
ACTCTCGACA GCGACAAGGC TTCTGCGGTC AAGACCGCAC AGGTCTGGCG TTCTGACTGG
CTGCCTCCTG GCTTCGAACT CACCAGTAGT TCCTCGCACA AGGATCCGGA AACCAAGACC
CAGGTCAACA GCCTGATGTA TGACGATGGT CTTGCCCGCT TCTCTGTTTT CCTGGAGCCG
CTGAATGGCG CAACCGTCAC CGATACCCGA ACTCAACTGG GCCCGACCGT TGCCGTATCC
CGTCGTTTGA CTACGCCTCA AGGCGAAATG ATGGTGACGG TCGTCGGCGA GATTCCAATC
GGGACCGCCG AACGGATTGC CCTGTCGATG CGCAATGATG GCGCTGCAAC CAGCAAGCAG
TGA
 
Protein sequence
MRAIPLLSLL LSGWFIVPAH ADEAQDWLTR LGQAEQQQSF HGTFVYERNG SFSTHNIWHR 
VQNGQVRERL LQLDGSAQEV VRIDGHTQCV SGTLIAGLGD SPNSAARPLD PQKLKNWYEL
AVIGKSRVAG REAVIVSLTP RDQHRYGFEL HLDKETGLPL KSLLLNDKGQ LLERFQFTRL
DTSEIPSDKD LQANSDCKTV TLDSDKASAV KTAQVWRSDW LPPGFELTSS SSHKDPETKT
QVNSLMYDDG LARFSVFLEP LNGATVTDTR TQLGPTVAVS RRLTTPQGEM MVTVVGEIPI
GTAERIALSM RNDGAATSKQ