Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1354 |
Symbol | |
ID | 3717301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1529310 |
End bp | 1529981 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | two component transcriptional regulator |
Protein accession | YP_347086 |
Protein GI | 77457581 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.776412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTCC TGCTCGTCGA AGACCATTTG CCGCTGGCCG AAAGCGTTGC CCAGGCGCTC AAGAGCACCG GTCTGACCGT GGACGTCTTG CACGATGGCG TGGCTGCCGA CCTGGCTCTG GGCAGCGAGG AATACGCGGT GGCGATCCTT GATGTCGGCC TGCCACGCAT GGACGGTTTT GAAGTGCTGG CGCGCCTGCG GGCTCGGGGC AAGAATCTGC CGGTGCTGAT GCTGACCGCT CGTAGCGACG TCAAGGATCG GGTCCACGGG CTCAATCTCG GCGCCGACGA TTACCTCGCC AAACCGTTCG AACTCACCGA ACTCGAGGCG CGGGTCAAGG CCCTGTTGCG CCGCAGCGTG CTCGGCGGCG AACGCCAGCA GCGTTGCGGT GTGCTGGCCT ATGACCTCGA CACCCGGCGC TTCACCCTCG GCGATGAATT GTTGACGCTG ACTTCTCGCG AACAGGCGGT GCTCGAAGCG CTGATTGCCC GTCCCGGTCG GGTGATGAGC AAAGAACAGC TGGCTGCGCA GGTGTTCGGT CTCGACGAAG AGGCCAGCCC CGACGCCATC GAAATCTACG TGCATCGCCT GCGCAAAAAG CTCGACGGCC ATTCGGTGGC TATCGTGACC TTCCGCGGTC TGGGCTATCT GCTGGAAAGC CGCGATGCAT AA
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Protein sequence | MRVLLVEDHL PLAESVAQAL KSTGLTVDVL HDGVAADLAL GSEEYAVAIL DVGLPRMDGF EVLARLRARG KNLPVLMLTA RSDVKDRVHG LNLGADDYLA KPFELTELEA RVKALLRRSV LGGERQQRCG VLAYDLDTRR FTLGDELLTL TSREQAVLEA LIARPGRVMS KEQLAAQVFG LDEEASPDAI EIYVHRLRKK LDGHSVAIVT FRGLGYLLES RDA
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