Gene Pfl01_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1353 
Symbol 
ID3717300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1527882 
End bp1528859 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347085 
Protein GI77457580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0759073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAT CCCTGCGCCG TTTCGCCCTC GCCGCCGGTT GCGTGCTGTT CGCCGGCCAA 
CTGATGGCCG AACCGAAACG TCCGGAATGC ATTGCCCCCG CCTCCCCCGG CGGCGGTTTC
GACCTGACCT GCAAACTGGC GCAAAGCGCG CTGGTCAACG AAAAACTGCT GACCAAACCG
ATGCGCGTGA CCTACATGCC CGGCGGCGTC GGCGCGGTGG CGTACAACGC CGTCGTGGCG
CAGCGTCCGG CCGATGCCGG CACGCTGGTG GCGTGGTCCA GCGGCTCGCT GCTCAACCTG
GCTCAGGGCA AATTCGGCCG GTTCGATGAA ACCAACGTAC GCTGGCTGGC GGCGGTCGGC
ACCAGCTACG GCGCCATCGC GGTGAAAAGC GATTCGCCCT ACAAAACCCT CGATGATCTC
GTGCAGGCGC TGAAGAAAGA TCCGAGTTCC GTGGTCATCG GCTCCGGCGG TACCGTCGGC
AGCCAGGACT GGATGCAGAC CGCACTGATC GCAAAAGCCG CCGGGATCAA CCCGCGCGAC
CTGCGCTACG TCGCCCTCGA AGGGGGTGGA GAGATCGCTA CCGCGCTGCT CGGCGGTCAT
ATCCAGGTCG GCAGTACCGA CATCTCCGAC TCCATGCCGC ATATCCAGAG CGGCGACATG
CGCCTGCTGG CCGTGTTTGC CGAAAAACGC CTGGATGAGC CGGAAATGAA GGACATTCCT
ACCGCGCGTG AACAAGGCTA CGACATCGTC TGGCCGGTGG TGCGCGGCTT CTACCTCGGG
CCAAAAGTCA GCGATGAAGA CTACGCCTGG TGGAAAGACT CCTTCGACAA ACTGCTGGCC
TCGGAAGACT TCGCCAAGCT GCGTGATCAG CGTGAACTCT TCCCGTTCGC CATGACCGGT
CCCGAGCTGG ACACCTACGT CAAGAAGCAA GTGGCGGACT ACAAGGTACT GGCCAAAGAG
TTCGGCCTGA TTCAGTGA
 
Protein sequence
MNRSLRRFAL AAGCVLFAGQ LMAEPKRPEC IAPASPGGGF DLTCKLAQSA LVNEKLLTKP 
MRVTYMPGGV GAVAYNAVVA QRPADAGTLV AWSSGSLLNL AQGKFGRFDE TNVRWLAAVG
TSYGAIAVKS DSPYKTLDDL VQALKKDPSS VVIGSGGTVG SQDWMQTALI AKAAGINPRD
LRYVALEGGG EIATALLGGH IQVGSTDISD SMPHIQSGDM RLLAVFAEKR LDEPEMKDIP
TAREQGYDIV WPVVRGFYLG PKVSDEDYAW WKDSFDKLLA SEDFAKLRDQ RELFPFAMTG
PELDTYVKKQ VADYKVLAKE FGLIQ