Gene Pfl01_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1352 
Symbol 
ID3717299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1527367 
End bp1527825 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content60% 
IMG OID 
Productmembrane protein TctB, putative 
Protein accessionYP_347084 
Protein GI77457579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.132061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATTC AACGTATTTT TGCCTCGGTG CTGTTGCTGG CCTGTGCCGG CCTGGCGCTG 
ATGGCGTGGC CGTATCAGGC GGCTTTTTCC TACGAACCGG TCGGTCCTCG GGCATTCCCT
CTGTTGATGC TGGGTCTGAT GAGCCTGGCG CTGCTGTACA TGGTGTTTCG CCCGGCACCG
ATCAAACACA GCGATGACGA ACCGCCGCTG GATCGCGAAA CCCTGACCAA GATCGCGATC
TGCGTCGCCC TGCTGCTGGT GTTTGCCGGT TTGTTCGAGC CGCTGGGCTT CATTCTCAGC
AGCATTCTGA TCGGCATTCC GATGGCGCGC CTGTATGGCG GGCGCTGGTT ACCGAGCGTC
ATCGTCACAA CGCTGATGGC AATCGGTCTG TATGTGCTGT TCGACCGCGT GATGGACGTA
CCGCTGCCCC TCGGCCTGCT CGACGTTCTG GAGAACTGA
 
Protein sequence
MLIQRIFASV LLLACAGLAL MAWPYQAAFS YEPVGPRAFP LLMLGLMSLA LLYMVFRPAP 
IKHSDDEPPL DRETLTKIAI CVALLLVFAG LFEPLGFILS SILIGIPMAR LYGGRWLPSV
IVTTLMAIGL YVLFDRVMDV PLPLGLLDVL EN