Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1349 |
Symbol | |
ID | 3717296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1524128 |
End bp | 1524823 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | uracil-DNA glycosylase |
Protein accession | YP_347081 |
Protein GI | 77457576 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.170175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTG ACGACCGTAT CAAACTCGAA CCGAGCTGGA AGGAGGCACT GCGTGCCGAA TTCGACCAGC CCTACATGAC AGAGTTGCGC ACTTTTCTGC AGCAGGAGCG GGCGGCCGGC AAGGAAATCT ATCCGCCGGG ACCGATGATC TTCAACGCGT TGAACTCGAC GCCGCTGGAC AAGGTGAAAG TGGTCATTCT CGGCCAGGAT CCGTACCACG GCCCGGGCCA GGCCCACGGC TTGTGCTTCT CGGTGCAACC GGGCGTGCCG GCGCCGCCAT CGTTGGTCAA CATCTATAAA GAGTTGAAGC GCGACCTGAA CATCGACATC CCCAACCACG GCTATCTGCA GAGCTGGGCC GATCAGGGCG TGTTGATGCT CAACACCACC ATGACCGTCG AGCGTGCCAA CGCCAACGCG CACAAGGACA AGGGCTGGCA GTTCTTCACG GACCGGATCA TTGAGGTGGT CAGCCAGAAA CAACCGCATC TGGTATTCAT GCTGTGGGGC GCCCATGCGC AGAGCAAGCA GAAGCTGATC GATGCCACCA AGCATCTGGT ACTGACTTCG GTGCACCCGT CGCCGCTGTC GGCCTATCGC GGTTTCCTTG GCTGCGGGCA TTTCAGCCGC ACCAACAAAT TCCTGGAGCA GAACGGCGAA GCGCCGATCG AGTGGCGCCT GCCGCCGGTG GTCTGA
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Protein sequence | MTADDRIKLE PSWKEALRAE FDQPYMTELR TFLQQERAAG KEIYPPGPMI FNALNSTPLD KVKVVILGQD PYHGPGQAHG LCFSVQPGVP APPSLVNIYK ELKRDLNIDI PNHGYLQSWA DQGVLMLNTT MTVERANANA HKDKGWQFFT DRIIEVVSQK QPHLVFMLWG AHAQSKQKLI DATKHLVLTS VHPSPLSAYR GFLGCGHFSR TNKFLEQNGE APIEWRLPPV V
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