Gene Pfl01_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1312 
Symbol 
ID3717349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1486766 
End bp1487932 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content63% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_347044 
Protein GI77457539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCA GCCTCATTCT GCTCATCACC TGTTCCACCG TGTTCCTCGC CCAGTTGGGC 
ATGAGCATTT ACCTGCCGGC GCTGCCACAG ATCGCCAAGC ATTTACAGGT CGATGCAACA
CAGGTGGCCT GGGGCTTGTC GCTGTACCTG ATCGGCATGG CGCTGCCGAT GCTGCTGTGG
GGCAGTCTGG CGCAGCGCAT CGGCCGCAAA CCGGTGCTGC TCGCGGCGCT GGGGATTTAT
GGGCTGGCGA ACCTGGCGTT GCCGCTGGGT GCGACGCTGG AATCGTTCCT GTTGCTGCGA
CTGCTTCAGG GGATCGGCGC CAGCGGCATT TCGGTGATGG CGCGGGTGCT GATTCGAGAC
AGCTTTCGGG GGGATCTGCT GGCGAAGGCG TTGTCGTGGA TTTCGATTTC GTTCGTTGTC
GCGCTCGGGA TCGGGCAATA CGCCGGTTCG CTCATTCAGG TGACGCTGGG CTGGCAGGCG
ATCTTTTATC TGCTGGGCGC GGTCAGCCTG TTGATGGCCG CGATAGTCTC GCGCCTGAGT
TTCCCGAAAC TCGTCGAAGC GCCCACAACC GCTTCGCCCT GGGAGGTCTA TCGAACGATC
CTGATCCATC GGGCGTTTCT GCTGCCGGCG CTTGCGGGCG GTCTGGGTTA TGGCGTGATC
ATCGCGTTCA ACAGCGCTGC GCCGTTGATT CTGCAAGGCC CGTTCAACTG GTCGGCGACC
GCATATGGGT TGCTGGGCTG GCCGATCAGC GCCGCATATT TCCTGGGGGC GCTGGCGGTC
AATCGCTTTG TGCTGCGTAC CGGTCAGCAC CGGCTGATGA CACTGGGGGT CAGCCTGGTG
ATGGCCGGCA CTGGCGTGAT GCTGGCCGGC AGTCTGTTGG CCAGCTCGAT GGCCTGGCTG
CTCTGGCTGC CTTACTGCGT CGCCGTGTTC GGCCAGTCGC TGAACTATCC GATCAGCCTG
TCACGGGCCA ACGATGGTGC GCCGATTGCC GGCGCTTACG CGATGGCCCT GAGCGGTTTC
ATCCACCAAT TGATGGCTGC ACTGATCGGC GCGGTGGCCA GCCTGCTCGC CAGTCCGCAG
GCATGGCCGC TATCGATGCT GTGCTGCGTT CTGGCATTTG GCGCGGTGCT CTGCACGAGG
TTAACGCCCG ATCATCAGCC CGCTTAA
 
Protein sequence
MNPSLILLIT CSTVFLAQLG MSIYLPALPQ IAKHLQVDAT QVAWGLSLYL IGMALPMLLW 
GSLAQRIGRK PVLLAALGIY GLANLALPLG ATLESFLLLR LLQGIGASGI SVMARVLIRD
SFRGDLLAKA LSWISISFVV ALGIGQYAGS LIQVTLGWQA IFYLLGAVSL LMAAIVSRLS
FPKLVEAPTT ASPWEVYRTI LIHRAFLLPA LAGGLGYGVI IAFNSAAPLI LQGPFNWSAT
AYGLLGWPIS AAYFLGALAV NRFVLRTGQH RLMTLGVSLV MAGTGVMLAG SLLASSMAWL
LWLPYCVAVF GQSLNYPISL SRANDGAPIA GAYAMALSGF IHQLMAALIG AVASLLASPQ
AWPLSMLCCV LAFGAVLCTR LTPDHQPA