Gene Pfl01_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1310 
Symbol 
ID3717347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1484446 
End bp1485525 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347042 
Protein GI77457537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCTC GTGATAAAGT CGCCGTCCAT CTGCCCCTTT GTTTTGAGAC GTGCCCTGCA 
ATGACCGATT TTCTGGATGT CGACGCCACC CTCGAAGACT GGACCGCGTT GCGCGCCACC
ACCGACTTCA GTGGCCTGCT GCTGGGCAAC GGCGCCAGTC GTGCGGTGTG GGACGATTTC
GGCTACGACT CGCTGTTCGA AAACGCCCGT ACGGTGGAAG AAAAACCGTT AAGCCCGTCG
GAGCTGAGCG TGTTCGATGC GCTGCAGACG CGCAGTTTCG AGCAGGTGCT CGGCGCGCTG
AAAACCACCA GTCGGGTCAA CAAGGCGCTG GCCGTCAGCT CGGCCGCGCC GCGCAACCGC
TACTACGCGA TCAAGGAAGC GCTGATCAAC ACCGTGCACG CGGTACACAT CCCGTGGCGG
CTGATCGAAG CCTCAACCCT GACGACCCTG AACAGCGAAC TGGCGCGTTA TCGCACGGTG
TTCACCACCA ATTACGACCT GCTCAATTAC TGGGCCCTGC AACATCAGGG CGAGGTCATC
GACGACCTGT TCAACGGCCC CGATGCCAGT TTCGATCTGT GCGAAAGCCA CACTGGAAAA
CCGCGTCTGC TGTACCTGCA TGGTGGTCTG CATCTGGTGC GCAATCAGGA CGGCACCGCG
CGCAAACTGA CAGCGACCGA GGGCACGCTG CTCGGCAGTT TCGCGATCAA CAACACGATC
AAGACGCTCG ATGATGTGCC GCTGTTCGTC AACGAAGGGC CGAGCGCCGA CAAGCTCAAG
ACCATCCGCA GTTCCGATTA TCTGTCGTTC TGCTACGACC AGTTACTCGA ACACGGCGAC
AACCTGTGCA TCTTCGGCCA CGCCCTCGGC GAACAGGACA GCCACCTCGT GCGCGCCCTG
CGTCTGGCGA AACCGAAGAC CGTGGCGATC TCGATCTACC CGCGCAGCGC GGCGTTCATC
CAGCACCAGA AGCGCCACTA CGCGAAGCTG TTCGAGGGCA CGGGCGTCGA GTTGCGGTTC
TTTGATTCCA AGAGCCATGC GCTGGGCCAT CCGAAGCTGT CGGTACCGGT CGAGATCTGA
 
Protein sequence
MPARDKVAVH LPLCFETCPA MTDFLDVDAT LEDWTALRAT TDFSGLLLGN GASRAVWDDF 
GYDSLFENAR TVEEKPLSPS ELSVFDALQT RSFEQVLGAL KTTSRVNKAL AVSSAAPRNR
YYAIKEALIN TVHAVHIPWR LIEASTLTTL NSELARYRTV FTTNYDLLNY WALQHQGEVI
DDLFNGPDAS FDLCESHTGK PRLLYLHGGL HLVRNQDGTA RKLTATEGTL LGSFAINNTI
KTLDDVPLFV NEGPSADKLK TIRSSDYLSF CYDQLLEHGD NLCIFGHALG EQDSHLVRAL
RLAKPKTVAI SIYPRSAAFI QHQKRHYAKL FEGTGVELRF FDSKSHALGH PKLSVPVEI