| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1293 |
|---|
| Symbol | |
|---|
| ID | 3717369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1468540 |
|---|
| End bp | 1469997 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | amidase |
|---|
| Protein accession | YP_347025 |
|---|
| Protein GI | 77457520 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0666673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCCGT TAGCCATTGA TCCGATTGTC GCCCTCGACG CCGATGCGCT GTCCCGGGCG
ATCCATGCCC GCAAGGTGTC GTGCCGCGAG GTGATGCAGG CCTACCTGAC GCACATTGAT
CGCTTCAATC CGGCGGTCAA TGCGCTGGTT TCGCTGCGCC CGCAAGACGT GCTGCTGCGC
GAGGCCGATG AATGCGATCG GCAACTGGAT CGCAGCGAGT CCCGAGGCTG GATGCACGGC
ATGCCCCAGG CGATCAAGGA CCTGGCGGCC ACTGCCGGAC TGCGCACGAC CCTCGGCTCG
CCACTGTTCG CCGAGCAAGT GCCGCAGCAC GACGCGATCA GCGTGGCGCG GGTTCGCGAC
TGCGGCGCGA TCATCATCGG CAAAAGCAAC GTCCCGGAAT TCGGCCTCGG TTCGCAGACC
TACAACAGCG TGTTCGGCAC CACCACCAAC GCCTACGATC CGAGCCTGAT CGCCGGCGGC
AGCAGCGGCG GGGCGGCGGT GGCGCTGGCC CTGCGCCTGC TGCCGGTGGC CGACGGCAGT
GACATGATGG GCTCGCTGCG CAACCCGGCG GCGTTCAACA ACGTGTTCGG CTTCCGCCCG
TCCCAGGGCC GCGTGCCTCA CGGCCCGATG CCGGAAGTGT TCGTCCAGCA ACTGGCCACC
GAAGGGCCTA TGGGGCGCAC GGTCACCGAC GTCGCGCGAT TGCTCTCGAC CCAGGCCGGC
TACGATCCGC GTGTGCCGTT GTCGCTGGCT GATGAACCAC GGGATTTCGG GCAGGATCTG
CAACAGGACT GCTGCGGCCT GCGCCTCGGC TGGCTCGGCG ATTACAACGG CTATCTGCCG
ATGGAAGACG GCGTGTTGAG CCTGTGCGAA TCGGCGCTGG CGGATTTCAG TGCGCTGGGT
TGCCACGTCG AGGCCTGTCA GCCGGACTTT TCCATGGAAC GCCTGTGGCA GACCTGGCTC
ACCCACCGGC ATTTTCTGGT GCAGGGCAGC CTCGGCGCGG CCTATGCCTA TCCGCAAAAA
CGGGCGCTGC TCAAACCCGA AGCGCAATGG GAAATCGAGG GCGGTCTGCG TCTGACCGCT
GCCGAGGTCT ATCAGGCGTC AGTCGCGCGC AGTGAGTGGT ATCGCGCGTT GAGCGAGTTA
TTCGAGCGTT ACGATTTCCT GCTGTTGCCC ACCGCCCAAG TGTTCCCTTT TGATGCACAG
CAAGCGTGGC CGCGAGTCGT CGGCGGGCAG ACCATGGACA CCTATCACCG CTGGATGGAG
GTGGTGATCG GCCCGACGCT GGCGGGGCTG CCGAGCATCA GCGTGCCGGT CGGTTTCAAC
CCGGCCGGGC TGCCGATGGG CCTGCAAATC ATCGGTCCGG CCCAGGCGGA TCGGGCGGTG
CTGCAACTGG CCTACGCCCA TGAACAGTTG ACCCGCTGGG TCGAACGGCG ACCGCCGGCA
TGCCTGCAAT CGGCCTGA
|
|---|
| Protein sequence | MSPLAIDPIV ALDADALSRA IHARKVSCRE VMQAYLTHID RFNPAVNALV SLRPQDVLLR
EADECDRQLD RSESRGWMHG MPQAIKDLAA TAGLRTTLGS PLFAEQVPQH DAISVARVRD
CGAIIIGKSN VPEFGLGSQT YNSVFGTTTN AYDPSLIAGG SSGGAAVALA LRLLPVADGS
DMMGSLRNPA AFNNVFGFRP SQGRVPHGPM PEVFVQQLAT EGPMGRTVTD VARLLSTQAG
YDPRVPLSLA DEPRDFGQDL QQDCCGLRLG WLGDYNGYLP MEDGVLSLCE SALADFSALG
CHVEACQPDF SMERLWQTWL THRHFLVQGS LGAAYAYPQK RALLKPEAQW EIEGGLRLTA
AEVYQASVAR SEWYRALSEL FERYDFLLLP TAQVFPFDAQ QAWPRVVGGQ TMDTYHRWME
VVIGPTLAGL PSISVPVGFN PAGLPMGLQI IGPAQADRAV LQLAYAHEQL TRWVERRPPA
CLQSA
|
|---|
| |