Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1291 |
Symbol | |
ID | 3717367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1465978 |
End bp | 1467153 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | peptidase M20D, amidohydrolase |
Protein accession | YP_347023 |
Protein GI | 77457518 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.214577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCGAC ATCAGCACAT TCTGGCCTGG CTCAACGATG TGGCCAGCGA CCTGCACGCC ACCCGCCAGG ACATTCACGC CCACCCTGAA CTCGGTTTCG AAGAAAGCCG CACCTCGGCG CTGGTCGCCA GGTCGCTCGA AGAGTGGGGC TATGAAGTCC ACACCGGCGT CGGCAAGACC GGCGTGGTCG GCGTGCTGCG CAACGGCAGC AGCACGCGCA AACTCGGGCT GCGGGCCGAC ATGGATGCGC TGCCGATCAT CGAAAATACC GGTGTCGCCT ACAGCAGCCG GCATCAAGGC TGCATGCACG CCTGCGGCCA CGACGGGCAC ACCGCGATGT TGCTCGGTGC GGCGCGTTAT CTGGCCGCGA CCCGTCAGTT CGACGGCACC CTGACGCTGA TTTTTCAGCC CGCCGAAGAG GGCCAGGGCG GGGCGGAAGC GATGCTCGCC GATGGCCTGC TCGAACGTTT TCCGTGCGAT GCGCTGTTCG GCATGCACAA CATGCCGGGC CTGCCAGCGG GGCACCTGGG CTTTCGCGAA GGGCCGATGA TGGCTTCGCA GGATCTGCTC ACGGTGACCA TCGAAGGTGT CGGCGGCCAC GGCTCGATGC CGCATCTGGC GGTGGATCCG CTGGTTGCCG CAGCCAGTGT GGTGATGGCT TTGCAAACCG TGGTCGCGCG CAACATCGAT GCGCAGCAGG CGGCGGTGGT AACGGTCGGC GCATTGCAGG CCGGCGAAGC GGCGAACGTG ATTCCGCAAC AGGCGATCCT GCGCCTGAGC TTGCGTGCGT TGAATGCCGA AGTCCGTGTT CAGACACTGG ACCGCGTACG CTCGATCATC GAAGCGCAGG CCGAGAGCTT CGGCTGCACC TCGACCATCG AACACCGCCC GGCCTACCCG GTGCTGGTCA ACCACGCCGC CGAAACCGAG TTCGCCCGTC AGGTCGGCGT CGAACTGGTC GGTACCGACG CCGTCGATGG CAACACTCCG AAACTGATGG GCAGCGAAGA CTTCGCCTGG ATGCTCCAGC GCTGCCCCGG CGCCTATCTG TTCATCGGCA ACGGCGTGGC GCGGCCGATG GTGCATAACC CGGCCTACGA CTTCAACGAT GACATCCTGC TGACCGGCGC GGCGTATTGG GGCGCGCTCA CCGAGAGCTG GCTCAAGCCG GCCTGA
|
Protein sequence | MPRHQHILAW LNDVASDLHA TRQDIHAHPE LGFEESRTSA LVARSLEEWG YEVHTGVGKT GVVGVLRNGS STRKLGLRAD MDALPIIENT GVAYSSRHQG CMHACGHDGH TAMLLGAARY LAATRQFDGT LTLIFQPAEE GQGGAEAMLA DGLLERFPCD ALFGMHNMPG LPAGHLGFRE GPMMASQDLL TVTIEGVGGH GSMPHLAVDP LVAAASVVMA LQTVVARNID AQQAAVVTVG ALQAGEAANV IPQQAILRLS LRALNAEVRV QTLDRVRSII EAQAESFGCT STIEHRPAYP VLVNHAAETE FARQVGVELV GTDAVDGNTP KLMGSEDFAW MLQRCPGAYL FIGNGVARPM VHNPAYDFND DILLTGAAYW GALTESWLKP A
|
| |