Gene Pfl01_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1291 
Symbol 
ID3717367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1465978 
End bp1467153 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content66% 
IMG OID 
Productpeptidase M20D, amidohydrolase 
Protein accessionYP_347023 
Protein GI77457518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.214577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGAC ATCAGCACAT TCTGGCCTGG CTCAACGATG TGGCCAGCGA CCTGCACGCC 
ACCCGCCAGG ACATTCACGC CCACCCTGAA CTCGGTTTCG AAGAAAGCCG CACCTCGGCG
CTGGTCGCCA GGTCGCTCGA AGAGTGGGGC TATGAAGTCC ACACCGGCGT CGGCAAGACC
GGCGTGGTCG GCGTGCTGCG CAACGGCAGC AGCACGCGCA AACTCGGGCT GCGGGCCGAC
ATGGATGCGC TGCCGATCAT CGAAAATACC GGTGTCGCCT ACAGCAGCCG GCATCAAGGC
TGCATGCACG CCTGCGGCCA CGACGGGCAC ACCGCGATGT TGCTCGGTGC GGCGCGTTAT
CTGGCCGCGA CCCGTCAGTT CGACGGCACC CTGACGCTGA TTTTTCAGCC CGCCGAAGAG
GGCCAGGGCG GGGCGGAAGC GATGCTCGCC GATGGCCTGC TCGAACGTTT TCCGTGCGAT
GCGCTGTTCG GCATGCACAA CATGCCGGGC CTGCCAGCGG GGCACCTGGG CTTTCGCGAA
GGGCCGATGA TGGCTTCGCA GGATCTGCTC ACGGTGACCA TCGAAGGTGT CGGCGGCCAC
GGCTCGATGC CGCATCTGGC GGTGGATCCG CTGGTTGCCG CAGCCAGTGT GGTGATGGCT
TTGCAAACCG TGGTCGCGCG CAACATCGAT GCGCAGCAGG CGGCGGTGGT AACGGTCGGC
GCATTGCAGG CCGGCGAAGC GGCGAACGTG ATTCCGCAAC AGGCGATCCT GCGCCTGAGC
TTGCGTGCGT TGAATGCCGA AGTCCGTGTT CAGACACTGG ACCGCGTACG CTCGATCATC
GAAGCGCAGG CCGAGAGCTT CGGCTGCACC TCGACCATCG AACACCGCCC GGCCTACCCG
GTGCTGGTCA ACCACGCCGC CGAAACCGAG TTCGCCCGTC AGGTCGGCGT CGAACTGGTC
GGTACCGACG CCGTCGATGG CAACACTCCG AAACTGATGG GCAGCGAAGA CTTCGCCTGG
ATGCTCCAGC GCTGCCCCGG CGCCTATCTG TTCATCGGCA ACGGCGTGGC GCGGCCGATG
GTGCATAACC CGGCCTACGA CTTCAACGAT GACATCCTGC TGACCGGCGC GGCGTATTGG
GGCGCGCTCA CCGAGAGCTG GCTCAAGCCG GCCTGA
 
Protein sequence
MPRHQHILAW LNDVASDLHA TRQDIHAHPE LGFEESRTSA LVARSLEEWG YEVHTGVGKT 
GVVGVLRNGS STRKLGLRAD MDALPIIENT GVAYSSRHQG CMHACGHDGH TAMLLGAARY
LAATRQFDGT LTLIFQPAEE GQGGAEAMLA DGLLERFPCD ALFGMHNMPG LPAGHLGFRE
GPMMASQDLL TVTIEGVGGH GSMPHLAVDP LVAAASVVMA LQTVVARNID AQQAAVVTVG
ALQAGEAANV IPQQAILRLS LRALNAEVRV QTLDRVRSII EAQAESFGCT STIEHRPAYP
VLVNHAAETE FARQVGVELV GTDAVDGNTP KLMGSEDFAW MLQRCPGAYL FIGNGVARPM
VHNPAYDFND DILLTGAAYW GALTESWLKP A