| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1281 |
|---|
| Symbol | |
|---|
| ID | 3717357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1457594 |
|---|
| End bp | 1458226 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_347013 |
|---|
| Protein GI | 77457508 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.781108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCGTC GTACCAAAGA GGAAGCTCAG GAAACGCGCA GCCAGATTCT CGAAGCGGCC
GAGAAAGCCT TCTATGAGCG GGGCGTGGCC CGCACGACCC TGTCGGACAT CGCTACCTTG
GCCGGGGTGA CGCGCGGTGC GATCTACTGG CACTTCAGCA ACAAGGCCGA TCTGCTGCAG
GCCATGCTCG ATACCCTGCA TGAGCCGCTG GACGAACTGG CCAAGGCCAG CGAAAGCGAG
GACGAACCCG ATCCGCTGGG TTGCATGCGC AAATTGCTGA TTCATTTGTT TCATCAAGTT
GCGCTGGATC CGAAGACCCG GCGTATCAAC GAAATTCTGT TTCATAAGTG CGAGTTCACC
GATGAAATGT GCGACCTGCG CCAGCAGCGC CGGACCGCCA GCCTCGATTG CAATGTGCGG
ATCGCGCTGA CACTGAGTAA TGCGATCAAT CGTGGGCAGT TGCCGGCAGA CCTCGACACT
GCCCGGGCAG CCATCAGCAT TCACGCCTAT ATCGACGGCC TCCTTTATGG ATGGCTATTG
GCGCCGGACA GCTTCGAGCT GTACGCCGAG GCCGAACGCT GGGTCGATAC CGGGCTGGAC
ATGCTGCGCC TGAGCCCCAG CCTGCGCAAA TGA
|
|---|
| Protein sequence | MVRRTKEEAQ ETRSQILEAA EKAFYERGVA RTTLSDIATL AGVTRGAIYW HFSNKADLLQ
AMLDTLHEPL DELAKASESE DEPDPLGCMR KLLIHLFHQV ALDPKTRRIN EILFHKCEFT
DEMCDLRQQR RTASLDCNVR IALTLSNAIN RGQLPADLDT ARAAISIHAY IDGLLYGWLL
APDSFELYAE AERWVDTGLD MLRLSPSLRK
|
|---|
| |