| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1279 |
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| Symbol | |
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| ID | 3717394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 1453002 |
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| End bp | 1456166 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_347011 |
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| Protein GI | 77457506 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0197931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAT TTTTCATCGA CCGTCCGATT TTCGCCTGGG TAATTGCCCT GGTGATCATG
CTGGTCGGGG CACTTTCGAT CCTGAAACTG CCGATCAACC AGTACCCGAG CATTGCGCCA
CCGGCCATTG CAATCTCCGT GACCTACCCG GGTGCTTCGG CACAGACGGT TCAGGACACC
GTGGTGCAAG TGATCGAGCA GCAGCTCAAC GGTATCGACA ACCTGCGTTA TGTGTCCTCG
GAAAGTAACT CCGACGGCAG CATGACCATC ACCGCGACCT TCGAGCAAGG CACCAACTCC
GACACCGCGC AGGTTCAGGT CCAGAACAAG CTGAACCTGG CCACCCCGCT GCTGCCGCAG
GAAGTGCAGC AACAGGGTAT CCGCGTGACC AAGGCAGTGA AGAACTTCCT GCTGGTGATC
GGCGTGGTGT CGCGTGACGG CAGCATGACC AAGGACGACC TGTCCAACTA CATCGTGTCG
AACATGCAGG ACCCGATCTC GCGGACCGCC GGTGTAGGTG ACTTCCAGGT CTTCGGTGCC
CAGTACGCGA TGCGCATCTG GCTCGACCCG GCCAAGTTGA ACAACTTCAA CCTGACCCCG
GTCGACGTGA AAACCGCGAT TGCGGCGCAG AACGTCCAGG TGTCGTCCGG TCAGCTCGGT
GGCTTGCCTG CCGTGCAGGG CCAGCAGCTG AACGCCACGA TCATCGGCAA GACCCGTCTG
CAGACCGCCG AGCAGTTCAA AGAGATTCTG CTCAAGGTCA ACAAGGATGG CTCTCAGGTC
CGTCTGAAAG ACGTCGCCGA CGTCGGCCTG GGTGGCGAGA ACTATGCGAT CAGCGCCCAG
TTCAACGGCA GCCCGGCTTC CGGTCTGGCG GTAAAACTGG CCAACGGCGC CAACGCCCTC
GACACCGCCA AGGCACTGCG CAAGACGATT GACGACCTCA AGCCGTTCTT CCCGCAAGGC
ATGGAAGTGG TGTTCCCGTA CGACACCACC CCGGTGGTGA CCGAGTCGAT CAAGGGTGTG
GTTGAAACCC TGGTCGAAGC GATCGTACTG GTGTTCCTGG TGATGTTCCT GTTCCTGCAG
AACTTCCGCG CCACCGTCAT CACCACGATG ACCGTGCCGG TGGTATTGCT CGGCACGTTC
GGCATCCTCG CGGCGGCCGG CTTCAGCATC AACACCCTGA CCATGTTCGG CATGGTGCTG
GCCATCGGTT TGCTGGTGGA CGACGCCATC GTTGTGGTGG AAAACGTCGA GCGGGTGATG
AGCGAAGAAG GCTTGTCACC GAAGGAAGCG ACCAAGAAAT CCATGGGCCA GATCCAGGGC
GCCCTGGTCG GTATCGCCCT GGTGCTGTCG GCGGTATTGC TACCGATGGC ATTCTTTGGC
GGCTCCACCG GTGTGATCTA CAAGCAGTTC TCGATCACCA TCGTGTCGGC CATGGCGCTG
TCGGTACTGG TTGCACTGAT CTTCACCCCG GCGCTGTGCG CCACCATGCT CAAGGCGGTT
CCACACGGCG AACACGGCAC CCCGAAAAAA GGCTTCTTCG GCTGGTTCAA CCGTGGTTTC
GACCGCAGCG TCAAAAGCTA CGAGCGCGGC GTCGGCAACA TCCTGCGCCA CAAGGCCCCG
TACCTGCTGG CTTACCTGAT CATCTTCGTC GGCATGATCT GGCTGTTCCT GCGTATTCCA
TCGTCCTTCC TGCCGGAAGA AGACCAGGGC GTACTGTTCG CCCAGGTGCA GACCCCGGCC
GGTTCGAGTG CCCAGCGCAC TCAAGTGGTG GTGGATGAAA TGCGTGAGTT CCTGCTGCGT
CCGACCAAGG ATGGCGGTGA AGGCGACGCC GTAGCGTCGG TGTTCACCGT GACCGGCTTC
AACTTCGCCG GCCGTGGCCA GAGCTCGGGC ATGGCGTTCA TCATGCTCAA GCCGTGGCAC
GAGCGGAACG CCGACAACAG CGTGTTCAAA CTCGCCGCCC GCGCCCAGCA GCACTTCTTC
ACCTTCCGCG ATGCAATGGT GTTCGCCTTC GCCCCGCCGG CCGTACTGGA GTTGGGTAAC
GCCACCGGTT TCGACGTGTT CCTGCAGGAC CGTGCCGGTA TCGGTCACGA GCAACTGATG
GCCGCGCGTA ACCAGTTCCT GGGCATGGCC GCGCAAAGCA AAGTGCTGTC GCAGGTGCGT
CCGAACGGTC TGAACGACGA ACCACAGTTC CAGTTAGAAA TCGACGACGA GAAGGCCAGT
GCTCTGGGCA TCACCATCTC CGACATCAAC AACACCCTGT CGATTGCGCT GGGCAGTAGC
TACGTCAACG ACTTCATCGA CCGTGGTCGG GTGAAGAAGG TGTACGTACA GGGCCAGCCG
GACTCGCGCA TGAGCCCGGA AGACCTCAAG AAATGGTATG TGCGTAACGC CAGCGGCACC
ATGGTTCCGT TCTCCGCATT CGCCAAGGGG GAGTGGATCT ACGGCTCGCC AAAACTGTCG
CGTTACAACG GCGTGGAAGC AGTCGAGATT CTCGGTGCCC CGGCGCCTGG CTATTCCACC
GGTGAAGCCA TGGCCGAGGT CGAGGCGATT GCTGCCAAAC TGCCGAAGGG TGTCGGTATT
TCCTGGACCG GTCTGTCCTA TGAAGAGCGT CTGGCAGGTT CGCAGGCGCC GGCACTGTTC
GCGCTGTCGC TATTGATGGT GTTCCTGTGT CTGGCGGCTC TCTACGAGAG CTGGTCGATT
CCGATCGCCG TCGTGCTCGT CGTACCGCTG GGGATCATCG GGGCATTGCT GGCGACCAGT
CTGCGCGGTC TGTCCAACGA CGTGTACTTC CTGGTGGGTC TGTTGACGAC CATTGGTCTG
GCGGCGAAAA ACGCCATTCT GATCGTCGAA TTCGCCAAGG AACTGCACGA ACAGGGCAGC
AGTCTGCGCG ATGCCGCCAT CGAGGCTTGC CGCATGCGTC TGCGTCCGAT CATCATGACG
TCCCTGGCGT TCATCCTCGG CGTGGTGCCT CTGGCAATTT CCACCGGGGC AGGTTCGGGC
AGCCAGCACG CAATCGGCAC CGTGGTGATT GGCGGTATGA TCACTGCCAC CGTTCTGGCG
ATATTCTGGG TTCCACTGTT CTTCGTCACT GTGTCGTCCA TGGGTCAGCG CAAAAACGCC
GGCAAGGATG ACGCCATAGA AACTCCTAAA GAGGCTGGCC AATGA
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| Protein sequence | MSKFFIDRPI FAWVIALVIM LVGALSILKL PINQYPSIAP PAIAISVTYP GASAQTVQDT
VVQVIEQQLN GIDNLRYVSS ESNSDGSMTI TATFEQGTNS DTAQVQVQNK LNLATPLLPQ
EVQQQGIRVT KAVKNFLLVI GVVSRDGSMT KDDLSNYIVS NMQDPISRTA GVGDFQVFGA
QYAMRIWLDP AKLNNFNLTP VDVKTAIAAQ NVQVSSGQLG GLPAVQGQQL NATIIGKTRL
QTAEQFKEIL LKVNKDGSQV RLKDVADVGL GGENYAISAQ FNGSPASGLA VKLANGANAL
DTAKALRKTI DDLKPFFPQG MEVVFPYDTT PVVTESIKGV VETLVEAIVL VFLVMFLFLQ
NFRATVITTM TVPVVLLGTF GILAAAGFSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM
SEEGLSPKEA TKKSMGQIQG ALVGIALVLS AVLLPMAFFG GSTGVIYKQF SITIVSAMAL
SVLVALIFTP ALCATMLKAV PHGEHGTPKK GFFGWFNRGF DRSVKSYERG VGNILRHKAP
YLLAYLIIFV GMIWLFLRIP SSFLPEEDQG VLFAQVQTPA GSSAQRTQVV VDEMREFLLR
PTKDGGEGDA VASVFTVTGF NFAGRGQSSG MAFIMLKPWH ERNADNSVFK LAARAQQHFF
TFRDAMVFAF APPAVLELGN ATGFDVFLQD RAGIGHEQLM AARNQFLGMA AQSKVLSQVR
PNGLNDEPQF QLEIDDEKAS ALGITISDIN NTLSIALGSS YVNDFIDRGR VKKVYVQGQP
DSRMSPEDLK KWYVRNASGT MVPFSAFAKG EWIYGSPKLS RYNGVEAVEI LGAPAPGYST
GEAMAEVEAI AAKLPKGVGI SWTGLSYEER LAGSQAPALF ALSLLMVFLC LAALYESWSI
PIAVVLVVPL GIIGALLATS LRGLSNDVYF LVGLLTTIGL AAKNAILIVE FAKELHEQGS
SLRDAAIEAC RMRLRPIIMT SLAFILGVVP LAISTGAGSG SQHAIGTVVI GGMITATVLA
IFWVPLFFVT VSSMGQRKNA GKDDAIETPK EAGQ
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