| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1278 |
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| Symbol | |
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| ID | 3717393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 1451545 |
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| End bp | 1453005 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_347010 |
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| Protein GI | 77457505 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00202436 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGT CGCTACTCTC CATCGCAGTC GCCGCCTTCG TGCTGAGCGG TTGCTCGCTG
ATACCGGATT ATCAGCAGCC GGAAGCACCG GTGGCCGCGC AGTTCCCGCA GGGCCCGGCG
TACTCGCCGG CCCAGGCACC GGCGCAGGCC GCTGCCGAGC AGGGCTGGAA ACAGTTTTTC
CATGACCCGG CCCTGCAACA GCTGATCCAG GTCGCCCTGG AAAACAATCG CGACCTGCGT
GTCGCGGCGC TGAACATCGA CGCCTATGCG GCTCAATACC GCATCCAGCG CGCCGACCTG
TTCCCGGCCG TGTCGGCCAA TGCCAGCGGC AGCCGTCAGC GGGTTCCGGC CCGTGCGTCG
CAGACCGGTG AAGCGGCCAT CAGCAGTTCC TACTCCGCTA CCGTCGGCAT CAGCGCCTAC
GAACTCGACC TGTTCGGTCG GGTTCGCAGC CTGAGCGAAC AAGCGCTGCA ACAATACTTC
GCCACCGAAG AAGCGCGCCG CAGCACCCAG ATCAGCCTGG TGGCCAGCGT GGCCAACGCC
TACCTGACCT GGCAGGCCGA CAAGGAACTG CTCAAGCTGA CGCAAGACAC CCTCGGTGCC
TTCGAGGAAA GCTACAAGCT GACCAGTCGC AGCAACGAAG TCGGTGTGGC CTCGGCGCTG
GACCTGGCGC AGTCGCGTAC CTCGGTGGAA AACGCCCGGG CACAACTGGC GCGTTATACC
CGCCAGGTGG CCCAAGACGA AAACAGCCTG ACCCTGCTGC TGGGCACCGG CATCCCGGCC
AACCTGCAAG CGGCCAAGCC GCTGTCGGAT GACCTGCTGG CCGACGTACC GGCCGGTCTG
CCGTCGGATC TGCTGCAACG TCGTCCGGAC ATCCTGCAGG CCGAGTACAA CCTGAAGGCC
GCCAACGCCA ACATCGGCGC GGCCCGTGCA GCGTTCTTCC CGAGCATCAG CCTGACCGCC
AACGCGGGCA GCCTGAGCCC GGACCTGTCC GGCCTGTTCA AGGGCGGTTC GGGTACGTGG
CTGTTCCAGC CGCAGATCAA CCTGCCGATC TTCAACGCCG GCAGCCTGCG TGCAAGCCTC
GACTACGCCA AGATCCAGAA GGACATTGGC GTGGCGAACT ACGAGAAGTC CATTCAAACG
GCCTTCCAGG AAGTCGCCGA CGGCCTCGCC GCCCGCCAGA CCTACACCGA GCAGTTGCAG
GCCCAGCGTG ATTTCGTTCA GGCCAACCAG GATTACTACC GCCTGGCCGA GCGTCGCTAT
CGCATTGGCG TCGATAGCAA CCTGACCTTC CTCGATGCCC AGCGTCAGCT GTTCAGCGCA
CAACAATCGC TGATCACCGA CCGCCTCGCG CAGCTGACCA GTGCGGTCAA CCTGTACAAG
GCCCTGGGCG GTGGCTGGAA TGCGCAGACC GCGCAGAACG AGCCGCTCAA AGAAGAAGCG
CCGAAGATGA AGCTGTTCTG A
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| Protein sequence | MSKSLLSIAV AAFVLSGCSL IPDYQQPEAP VAAQFPQGPA YSPAQAPAQA AAEQGWKQFF
HDPALQQLIQ VALENNRDLR VAALNIDAYA AQYRIQRADL FPAVSANASG SRQRVPARAS
QTGEAAISSS YSATVGISAY ELDLFGRVRS LSEQALQQYF ATEEARRSTQ ISLVASVANA
YLTWQADKEL LKLTQDTLGA FEESYKLTSR SNEVGVASAL DLAQSRTSVE NARAQLARYT
RQVAQDENSL TLLLGTGIPA NLQAAKPLSD DLLADVPAGL PSDLLQRRPD ILQAEYNLKA
ANANIGAARA AFFPSISLTA NAGSLSPDLS GLFKGGSGTW LFQPQINLPI FNAGSLRASL
DYAKIQKDIG VANYEKSIQT AFQEVADGLA ARQTYTEQLQ AQRDFVQANQ DYYRLAERRY
RIGVDSNLTF LDAQRQLFSA QQSLITDRLA QLTSAVNLYK ALGGGWNAQT AQNEPLKEEA
PKMKLF
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