Gene Pfl01_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1275 
Symbol 
ID3717390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1448566 
End bp1448958 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content62% 
IMG OID 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_347007 
Protein GI77457502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.537713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGAGA AACAACGTTA CGACGACGGC ATGCAAGTGC GCCGCGCGGT GCTCGGCGAC 
GCTCACGTCG ATCGCAGCCT GACCACGCTG ACCGAGTTCA ACTCGGAGTT CCAGGAGATG
ATCACCCGTC ACGCCTGGGG CGACATCTGG ACCCGCCCGG GCCTGCCACG CCATACCCGC
AGCCTGATCA CCATCGCCAT GCTGATCGGC ATGAACCGCG AAGGTGAACT GAAGTTGCAC
CTTCGCGCAG CGGCGAACAA TGGCGTGAGC CGAGGCGAGA TCAAGGAAGT GATCATGCAG
AGTGCGATCT ACTGCGGGAT TCCGGCGGCG AATGCGACCT TTCATCTGGC CGAGTCGGTG
TGGGATGAGC TGGGTACCGA ATCCCGCGAG TAA
 
Protein sequence
MDEKQRYDDG MQVRRAVLGD AHVDRSLTTL TEFNSEFQEM ITRHAWGDIW TRPGLPRHTR 
SLITIAMLIG MNREGELKLH LRAAANNGVS RGEIKEVIMQ SAIYCGIPAA NATFHLAESV
WDELGTESRE