| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1272 |
|---|
| Symbol | |
|---|
| ID | 3717387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1445006 |
|---|
| End bp | 1446340 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | citrate-proton symport |
|---|
| Protein accession | YP_347004 |
|---|
| Protein GI | 77457499 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.414334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGAC TGTCACTGTC CCTATCGAGT GAAAAAATAA TGACAACCAC CACCTCCCAT
TACACCGGCG AAGAGCGCAG CAAGCGCATC TTTGCCATTG TCGGTGCCTC GTCCGGCAAC
CTCGTCGAAT GGTTCGACTT CTACGTCTAC GCTTTCTGCG CGATCTACTT CGCCCCGGCG
TTTTTTCCCT CGGACAACCC CACGGTGCAG CTGGTCAACA CCGCTGGCGT TTTCGCCGCC
GGGTTTCTGA TGCGACCGAT CGGCGGCTGG ATTTTCGGCC GGGTCGCAGA CAAGCACGGG
CGCAAGAACT CGATGCTGAT CTCGATCCTG ATGATGTGCT TCGGCTCGTT GTTGATCGCC
TGTCTGCCGA CCTACAAGGA CATCGGCGTC TGGGCGCCGC TGTTGCTGTT GTTCGCGCGT
CTGCTGCAAG GCCTGTCGGT GGGCGGTGAG TACGGCACCA CCGCGACCTA CATGAGCGAA
GTCGCGCTCA AGGGCCAGCG CGGGTTCTTC GCCTCGTTCC AGTACGTGAC CCTGATCGGC
GGGCAACTGC TGGCGGTGCT GCTGGTGGTG ATCCTGCAAC AGTTCCTCAC CGAAGAAGAA
TTGCGTGCCT ACGGCTGGCG GATTCCGTTC GTGGTCGGTG CGGCCGCCGC GCTGATTTCG
CTGTTCCTGC GTCGCTCGCT GAAAGAAACC ACGAGCAAGG AAATGCGCGA GAACAAGGAC
GCCGGCAGCA TCCGCGCACT GTTCCGCGAC CACAAGGCTG CGTTCATCAC CGTGCTGGGT
TACACCGCCG GCGGCTCGCT GATTTTCTAC ACCTTCACCA CGTACATGCA GAAGTACCTG
GTGAACACCG CCGGCATGCA CGCCAAGACC GCCAGCTACA TCATGACCGG CGCGCTGTTC
CTGTACATGT GCATGCAGCC GCTGTTCGGC ATGCTCGCCG ACAAGATCGG CCGGCGTAAC
TCGATGCTCT GGTTCGGCGG CCTCGGCACG TTGTTCACAG TGCCGATCCT GCTCAGCCTG
AAAAGTGTCG GCAGTCCGTT CCTGGCCTTT GTGCTGATCA CCCTGGCGCT GGCGATCGTC
AGTTTCTACA CCTCGATCAG CGGTCTGGTG AAAGCCGAGA TGTTCCCGCC GGAAGTCCGC
GCCCTCGGCG TCGGCCTGGC CTACGCGGTG GCTAACGCGA TCTTCGGCGG GTCGGCCGAA
TACGTGGCCC TGAGCCTCAA GGCTGGCGGC ATGGAAAACG CGTTCTACTG GTATGTCACG
ATCATGATGG CCGTGGCATT CCTGTTCAGC CTGCGCTTGC CCAAAGAAGC GAAGTATTTG
CACCACGACC TTTAA
|
|---|
| Protein sequence | MSRLSLSLSS EKIMTTTTSH YTGEERSKRI FAIVGASSGN LVEWFDFYVY AFCAIYFAPA
FFPSDNPTVQ LVNTAGVFAA GFLMRPIGGW IFGRVADKHG RKNSMLISIL MMCFGSLLIA
CLPTYKDIGV WAPLLLLFAR LLQGLSVGGE YGTTATYMSE VALKGQRGFF ASFQYVTLIG
GQLLAVLLVV ILQQFLTEEE LRAYGWRIPF VVGAAAALIS LFLRRSLKET TSKEMRENKD
AGSIRALFRD HKAAFITVLG YTAGGSLIFY TFTTYMQKYL VNTAGMHAKT ASYIMTGALF
LYMCMQPLFG MLADKIGRRN SMLWFGGLGT LFTVPILLSL KSVGSPFLAF VLITLALAIV
SFYTSISGLV KAEMFPPEVR ALGVGLAYAV ANAIFGGSAE YVALSLKAGG MENAFYWYVT
IMMAVAFLFS LRLPKEAKYL HHDL
|
|---|
| |