| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1266 |
|---|
| Symbol | |
|---|
| ID | 3717381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1439224 |
|---|
| End bp | 1440570 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | benzoate transport |
|---|
| Protein accession | YP_346998 |
|---|
| Protein GI | 77457493 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGC CTCAGTCCGC TGTAGGTCAC TGCCTCGACG TGCAGTCCTT CATCAATGCC
CAACCGATCT CGCGCTATCA GTGGCGCGTG GTGATCCTGT GTTTCCTGAT TGTGTTCCTC
GATGGCCTCG ACACCGCGGC CATGGGTTTT ATCGCGCCGG CCCTGTCCCA GGACTGGGGC
ATCGACCGCG CCAGCCTCGG CCCGGTGATG AGTGCCGCGC TGATCGGCAT GGTCTTCGGC
GCGCTGGGCT CCGGTCCGCT GGCTGACCGC TTCGGGCGAA AAGTCGTACT GGTCGGCGCG
GTATTTCTGT TCGGCGCCTT CAGCCTGGCT TCGGCCTACG CCACCAACGT CGATCAACTG
CTGGTACTGC GCTTCCTCAC CGGTCTGGGA CTGGGCGCGG GGATGCCGAA CGCCACCACG
CTGTTGTCGG AATACACCCC GGAGCGCAAG AAGTCATTGC TGGTGACCAG CATGTTCTGC
GGCTTCAACC TGGGCATGGC CGGCGGTGGA TTCATCTCGG CCAAGCTGAT CCCGGCATTC
GGCTGGCACA GCCTGTTGCT GATCGGCGGG ATCCTGCCGC TGATCCTCAC CGTGGTATTG
CTGCTCTGGC TGCCGGAATC GGCGCGCTAT CTGGTGGTGC GCAATCGCGG CACTGACAAG
GTGCGCAAGA CTCTCGCACC CATTGATCCT GCCATCGTCG CTCAGGCCGC GAGTTTCAGC
GTGCCGGAAC AGAAAACCGT CAAAGCGCGC AACGTGTTCG CGGTGATTTT CTCCGGTACC
TACAGCGTCG GCACGTTGCT GCTGTGGCTG ACCTACTTCA TGGGCCTGGT GATTGTTTAC
CTGCTGACCA GCTGGCTGCC GACCCTGATG CGCGACAGCG GCGCGAGCAT GGAGCAGGCG
GCGTTTATCG GCGCGCTGTT CCAGTTCGGC GGGGTGTTGA GTGCGGTCGG CGTGGGCTGG
GCGATGGACC GCTTCAATCC GCACAAGGTC ATCGGCATTT TCTACCTGCT GGCCGGGGTT
TTTGCCTACG CGGTGGGGCA GAGTCTGGGC AACATCACGC TGCTGGCGAC GTTGGTGCTG
GTGGCGGGCA TGTGTGTCAA CGGTGCGCAA TCGGCGATGC CGTCGCTGGC AGCGCGGTTT
TATCCGACGC AGGGCCGGGC GACCGGTGTC TCGTGGATGC TCGGGATCGG CCGCTTCGGC
GCGATTCTCG GGGCGTGGAT GGGCGCAACC CTGTTGGGCC TGGGCTGGAA TTTCGAACAG
GTGCTGACAG CGTTGGTGAT CCCGGCCGGG CTGGCCACGG CAGCGGTGGT GATCAAGGGC
CTGGTCAGTC ACGCGGACGC AACCTGA
|
|---|
| Protein sequence | MNQPQSAVGH CLDVQSFINA QPISRYQWRV VILCFLIVFL DGLDTAAMGF IAPALSQDWG
IDRASLGPVM SAALIGMVFG ALGSGPLADR FGRKVVLVGA VFLFGAFSLA SAYATNVDQL
LVLRFLTGLG LGAGMPNATT LLSEYTPERK KSLLVTSMFC GFNLGMAGGG FISAKLIPAF
GWHSLLLIGG ILPLILTVVL LLWLPESARY LVVRNRGTDK VRKTLAPIDP AIVAQAASFS
VPEQKTVKAR NVFAVIFSGT YSVGTLLLWL TYFMGLVIVY LLTSWLPTLM RDSGASMEQA
AFIGALFQFG GVLSAVGVGW AMDRFNPHKV IGIFYLLAGV FAYAVGQSLG NITLLATLVL
VAGMCVNGAQ SAMPSLAARF YPTQGRATGV SWMLGIGRFG AILGAWMGAT LLGLGWNFEQ
VLTALVIPAG LATAAVVIKG LVSHADAT
|
|---|
| |