Gene Pfl01_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1254 
Symbol 
ID3717408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1426763 
End bp1428112 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content63% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_346986 
Protein GI77457481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACT CGACCCAAGC GGCGAATGCC TGGCGCATTC TGTTCCTGCT GTTCCTTGCC 
AACCTGTTCA ACTTCTTCGA CCGCACCATC CCGGCGATCA TCATCGAGCC GATCCGCATG
GAATGGCACC TCAGCGACTT TCAGCTGGGG ATTGTCGGCA CTGCGTTCAC TCTGGTCTAC
GCGATTGCCG GGCTACCACT GGGCCGAATG GCCGACACCG GTTCGCGCAG CAAACTGATG
GGTTGGGGCC TGGCGACCTG GAGCGCGCTC ACTGCCGTGA ACGGTCTGGT CGGCAGTTTC
TGGAGTTTTC TGCTGGTGCG CATGGGCATC GGCATCGGTG AAGCCAGTTA CGCGCCCGCC
GCCAACTCGC TGATCGGCGA CCTGTTCCCG GCCCATCGCC GGGCCCGGGC CATGGGCATC
TTCATGCTCG GCCTGCCGCT GGGACTGCTG CTGGCCTTCT TCACCATCGG CTGGATGGTC
AAGGCATTCG ACAGCTGGCG CGCACCGTTT TTCATCGCCG CCGTGCCGGG GCTGGTGCTG
GCGGTGTTCA TGTTTTTCAT CAAGGAACCC AAGCGTGGCG CGGCGGAAAC CGTACAGGTG
TCCCAGGAGA AAGTCGACAG GCCGATTCGT CGGGTCCTCG CCATTCCGAC CTTCCTGTGG
CTGGTGATGG CCGGGCTGTG CTTCAACTTC GCGACCTACG CCTGCAACTC GTTCCTGGTG
CCGATGCTCC AGCGTTATTT CCTGATGCCG TTGCAGGAAG CGGCGGTGGC GACCGGGGTA
ATCGTCGGTG TGACCGGGTT GATCGGCCTG ACCCTCGGCG GCTGGATCGC CGACAAGATT
CACCAGCGGG TGGCCAACGG GCGACTGCTG TTTGCCGCGT TCAGCCTGAT CATCTCGACC
CTGTGCACGG CGTGGGCGCT GCATGCCGGG CGTATCGAGA TCGGGGTGTT TGTCGCGGTG
TTCAGTGTGG GCTGGCTGTT CGCCTACAAC TTCTACACCT GCGTGTACAC GGCGATTCAG
GACGTGGTCG AGCCGCGCCT GCGGGCTACG GCGATGGCGC TGTTCTTTGC CGGCTTGTAT
TTGCTCGGCG GCGGGCTGGG TCCGGTGGTG GTCGGCGGCT TGTCGGATCA CTTCGCCAAG
TCGGCGATGG TCGCGGCGGG CGCCGAGCAG ATGACCGAAG CCTTCAAGGC CGTCGGCCTG
CATGATGCGA TGTACCTGAT TCCGGTGGCG TTGTTCCTGA CCATGGTGTT CCTGTTCCTC
GCCTCGCGCT GCTTTGTGCG GGATGCGAAG CGGATGAAGG AGGGGCTGGT GGCAGTGGTT
GAGCCGCAGA ATCAGGCCGT TACCGCTTGA
 
Protein sequence
MQNSTQAANA WRILFLLFLA NLFNFFDRTI PAIIIEPIRM EWHLSDFQLG IVGTAFTLVY 
AIAGLPLGRM ADTGSRSKLM GWGLATWSAL TAVNGLVGSF WSFLLVRMGI GIGEASYAPA
ANSLIGDLFP AHRRARAMGI FMLGLPLGLL LAFFTIGWMV KAFDSWRAPF FIAAVPGLVL
AVFMFFIKEP KRGAAETVQV SQEKVDRPIR RVLAIPTFLW LVMAGLCFNF ATYACNSFLV
PMLQRYFLMP LQEAAVATGV IVGVTGLIGL TLGGWIADKI HQRVANGRLL FAAFSLIIST
LCTAWALHAG RIEIGVFVAV FSVGWLFAYN FYTCVYTAIQ DVVEPRLRAT AMALFFAGLY
LLGGGLGPVV VGGLSDHFAK SAMVAAGAEQ MTEAFKAVGL HDAMYLIPVA LFLTMVFLFL
ASRCFVRDAK RMKEGLVAVV EPQNQAVTA