Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1254 |
Symbol | |
ID | 3717408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1426763 |
End bp | 1428112 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | general substrate transporter |
Protein accession | YP_346986 |
Protein GI | 77457481 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGAACT CGACCCAAGC GGCGAATGCC TGGCGCATTC TGTTCCTGCT GTTCCTTGCC AACCTGTTCA ACTTCTTCGA CCGCACCATC CCGGCGATCA TCATCGAGCC GATCCGCATG GAATGGCACC TCAGCGACTT TCAGCTGGGG ATTGTCGGCA CTGCGTTCAC TCTGGTCTAC GCGATTGCCG GGCTACCACT GGGCCGAATG GCCGACACCG GTTCGCGCAG CAAACTGATG GGTTGGGGCC TGGCGACCTG GAGCGCGCTC ACTGCCGTGA ACGGTCTGGT CGGCAGTTTC TGGAGTTTTC TGCTGGTGCG CATGGGCATC GGCATCGGTG AAGCCAGTTA CGCGCCCGCC GCCAACTCGC TGATCGGCGA CCTGTTCCCG GCCCATCGCC GGGCCCGGGC CATGGGCATC TTCATGCTCG GCCTGCCGCT GGGACTGCTG CTGGCCTTCT TCACCATCGG CTGGATGGTC AAGGCATTCG ACAGCTGGCG CGCACCGTTT TTCATCGCCG CCGTGCCGGG GCTGGTGCTG GCGGTGTTCA TGTTTTTCAT CAAGGAACCC AAGCGTGGCG CGGCGGAAAC CGTACAGGTG TCCCAGGAGA AAGTCGACAG GCCGATTCGT CGGGTCCTCG CCATTCCGAC CTTCCTGTGG CTGGTGATGG CCGGGCTGTG CTTCAACTTC GCGACCTACG CCTGCAACTC GTTCCTGGTG CCGATGCTCC AGCGTTATTT CCTGATGCCG TTGCAGGAAG CGGCGGTGGC GACCGGGGTA ATCGTCGGTG TGACCGGGTT GATCGGCCTG ACCCTCGGCG GCTGGATCGC CGACAAGATT CACCAGCGGG TGGCCAACGG GCGACTGCTG TTTGCCGCGT TCAGCCTGAT CATCTCGACC CTGTGCACGG CGTGGGCGCT GCATGCCGGG CGTATCGAGA TCGGGGTGTT TGTCGCGGTG TTCAGTGTGG GCTGGCTGTT CGCCTACAAC TTCTACACCT GCGTGTACAC GGCGATTCAG GACGTGGTCG AGCCGCGCCT GCGGGCTACG GCGATGGCGC TGTTCTTTGC CGGCTTGTAT TTGCTCGGCG GCGGGCTGGG TCCGGTGGTG GTCGGCGGCT TGTCGGATCA CTTCGCCAAG TCGGCGATGG TCGCGGCGGG CGCCGAGCAG ATGACCGAAG CCTTCAAGGC CGTCGGCCTG CATGATGCGA TGTACCTGAT TCCGGTGGCG TTGTTCCTGA CCATGGTGTT CCTGTTCCTC GCCTCGCGCT GCTTTGTGCG GGATGCGAAG CGGATGAAGG AGGGGCTGGT GGCAGTGGTT GAGCCGCAGA ATCAGGCCGT TACCGCTTGA
|
Protein sequence | MQNSTQAANA WRILFLLFLA NLFNFFDRTI PAIIIEPIRM EWHLSDFQLG IVGTAFTLVY AIAGLPLGRM ADTGSRSKLM GWGLATWSAL TAVNGLVGSF WSFLLVRMGI GIGEASYAPA ANSLIGDLFP AHRRARAMGI FMLGLPLGLL LAFFTIGWMV KAFDSWRAPF FIAAVPGLVL AVFMFFIKEP KRGAAETVQV SQEKVDRPIR RVLAIPTFLW LVMAGLCFNF ATYACNSFLV PMLQRYFLMP LQEAAVATGV IVGVTGLIGL TLGGWIADKI HQRVANGRLL FAAFSLIIST LCTAWALHAG RIEIGVFVAV FSVGWLFAYN FYTCVYTAIQ DVVEPRLRAT AMALFFAGLY LLGGGLGPVV VGGLSDHFAK SAMVAAGAEQ MTEAFKAVGL HDAMYLIPVA LFLTMVFLFL ASRCFVRDAK RMKEGLVAVV EPQNQAVTA
|
| |