| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1252 |
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| Symbol | |
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| ID | 3717406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 1423661 |
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| End bp | 1425943 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_346984 |
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| Protein GI | 77457479 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.849617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTGGC TTGGTTTGCA GTTCGTTGCC GAGCAGCCGG AGAGCGGGCA GGTCATCCTC
AATTGCACAC ACAATCCCCT GCTGGTGCTG GTGGCTTACC TGGTCGCCTG CGCCGCGAGC
TTCGCCACCC TCGACATGGC CGAACGGGTC GCCCACGCTG AAGAGCCCGG CTCGCAGCGG
ATATGGCGCT GGATCGGTGC CACCTGTCTG GCCGGCGGCA TCTGGGCCAT GCACTTCATC
AGCATGCTGG CGTTCCAGGC GCCGATCGGC ATTCAGTACG ACCTGCCCGT GACCCTGTTT
TCCCTGGTGA TCGCGCTACT GGCGTCCTGG CTGGCGATGC ACACCCTGAG CACGCCCCAG
CCGAGCCTGC TGCAGTACCT CAAGACCGCC ATCGTCATTG GTCTGGGCAT CGCCGGCATG
CACTACGTCG GCATGGCCGC CATCGAATCC GCCGCCTCGG CTTACTACGA CCCCACTCTG
TTTCTGGCCT CGATCGTGAT CGCGATCGGC GCCAGCTTCG CCGCACTGTG GGTGGCCGGT
TATCTGCGCG AAGGCAGCGG CCTGCACATC CAGATGCTCA AATACGTGGC GGCGCTGATT
CTCGGTGCGG GCATCCTCAG CATGCATTTC ACCGGCATGG CGGCGCTGCA ACTGGTGCTG
CCCGAAGGGC AACTGCCGAC CCTGGCGTCG CAAACCAGCC ATTTGCAGTT GGGCCTGACC
GTCGCGCTGA TCACCTTGCT GATTCTTGGC AGCGCCATCA GCGCCGCATT GGCCGACAAG
AAGCTGCAGA ACAAGGAGCA CGATCTGCGC CGGGTCAACG CCCTGCTCAG CCAGCTGGAT
CAGGCACGCA TGTCGCTGCA GCACGTGGCC AACTACGACG CGCTGACCAA CCTGATCAAC
CGGCGTGGCT TCAATCAGAT CTTCGCTGAA AAACTCAGCC AGAAAACCAG CGAAGGCGGG
ATGCTGGCAG TGATGTTTCT CGACATCGAC CACTTCAAAC GCATCAATGA CAGCCTCGGC
CATGACGCCG GCGACGAACT GCTGAAGGTC ATTGCCCAGC ACATCAAGGG CTCGGTGCGC
AGCCATGAAG ATGTGGTGGC GCGGTTCGGC GGCGACGAGT TCTGCATCCT GATCGGTCTG
CGCGACCGCG AAGAGGCGCG CAACCTGGCC CAGCGCATCA TGCTCAAGAT GAAAGAGCCG
ATCGAACTGG CCGGACGGCG CATGGTGATG ACCACCAGCA TCGGCATCAG CCTGTTTCCC
GAGGACGGGT CCACCTGCGA TGAACTGCTC AAGCACGCGG ATCTGGCGCT GTACCAGTCC
AAGGGCGCCG GGCGCAACGG CGTGCACTTT TTCGATTCCA ATCTGAAAAA CCGCGCCAGC
CTTGAACTGC AACTGGAGGA AGAGTTGCGC CACGCGCTGC GTCAGGAGAA CGGTCTGCTG
CTGTATTACC AGCCGATCTT CGAACTCAAG ACCGGCAAGG TTACCAAGCT TGAAGCGCTG
ATCCGCTGGC AGCACCCGGT GCACGGCCTG CTCACCCCGG ACCGATTCAT TGCCATCGCC
GAAAACAACG GCCTGATTGC CGAACTCGAC AACTGGGTCC TGCGCAAGGC CTGTGAGGAC
CTTGGCGAGC TGTCGCGCCA TGGCTGTGAA GAACTGAAGA TTGCCTGGAA CTGCTCACCG
CTGAATCTGG CCCGGGAAGA ACTGGCCAAT GAAATCGAGC ATGCCTTGCG CAGCGCCGGG
GTCGCCCCGG AACGGCTGGA ACTGGAAGTC ACCGAAAACG CCTTGATGGG CAACATCGCC
AACACCCTGG TGCTGCTGCG GCAGATCCGC GCCCTCGGCG TGTCACTGTC GATCGACGAC
TTCGGTACCG GCTATTCGTC GCTGGCCTAT CTCAAACGCC TGCCGCTCAA CACCCTGAAG
GTCGACCGCT CGTTCATCCT CGACATTCCC AAGGCCACCG CCGACATGGA GATCGTCCAG
GCGATCATCG TCATGGCGCA CACCCTGCAC TTGCAGGTGG TCACCGAAGG CGTCGAAAGC
CTGGAGCAAT ACGAATTCCT GGAGCGCTCG GGCTGCGACT TCATTCAGGG TTACCTGCTC
AGCCGCCCGG TGCCACTGGC CGAACTGCGT CCGGTGCTGG AGGAAATCAA TCAGCGCAAA
CACGCGCACG CGGTCAATCC GTTGAGTCTG GCGCGCGGTA CATTTGCACC AGTGTCGCTG
GATCCTTCTG CAAAAAGCCT TGTGCCCCAT GCAGGCGCAT CAGTTGTGCG GCCAATCCGC
TGA
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| Protein sequence | MEWLGLQFVA EQPESGQVIL NCTHNPLLVL VAYLVACAAS FATLDMAERV AHAEEPGSQR
IWRWIGATCL AGGIWAMHFI SMLAFQAPIG IQYDLPVTLF SLVIALLASW LAMHTLSTPQ
PSLLQYLKTA IVIGLGIAGM HYVGMAAIES AASAYYDPTL FLASIVIAIG ASFAALWVAG
YLREGSGLHI QMLKYVAALI LGAGILSMHF TGMAALQLVL PEGQLPTLAS QTSHLQLGLT
VALITLLILG SAISAALADK KLQNKEHDLR RVNALLSQLD QARMSLQHVA NYDALTNLIN
RRGFNQIFAE KLSQKTSEGG MLAVMFLDID HFKRINDSLG HDAGDELLKV IAQHIKGSVR
SHEDVVARFG GDEFCILIGL RDREEARNLA QRIMLKMKEP IELAGRRMVM TTSIGISLFP
EDGSTCDELL KHADLALYQS KGAGRNGVHF FDSNLKNRAS LELQLEEELR HALRQENGLL
LYYQPIFELK TGKVTKLEAL IRWQHPVHGL LTPDRFIAIA ENNGLIAELD NWVLRKACED
LGELSRHGCE ELKIAWNCSP LNLAREELAN EIEHALRSAG VAPERLELEV TENALMGNIA
NTLVLLRQIR ALGVSLSIDD FGTGYSSLAY LKRLPLNTLK VDRSFILDIP KATADMEIVQ
AIIVMAHTLH LQVVTEGVES LEQYEFLERS GCDFIQGYLL SRPVPLAELR PVLEEINQRK
HAHAVNPLSL ARGTFAPVSL DPSAKSLVPH AGASVVRPIR
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