Gene Pfl01_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1242 
Symbol 
ID3717396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1413147 
End bp1414043 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346974 
Protein GI77457469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.933604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGATCA TGATCACATC CTGCGACCAT GCCTTGCGCC GCACTCGGGC AGCCCTCACC 
GGGCTCCCGT CCCGTGCCGG GCTGGGGCTC AAGAGCGAGC ACTTCAGCGA AGTGCTCGAT
TCACGTCCGG ACATCGGTTT TTTCGAAGTC CACGCCGAAA ACTACATGGT GGCCGGCGGC
CCGTTTCATC ATTTTCTGGG TTTGATTCGC GACGCGTATC CGCTGTCGTT GCATGGCGTC
GGGCTGTCCA TCGGTGCCGA AGGCGCGCTG GATGTCCAGC ACCTCAAACG CCTGTCAGCG
CTGATCGAGC GCTATCAACC CCACTCTTTT TCCGAACACC TGGCCTGGTC GAGCCATGGC
CCGGTGTTTC TCAATGATTT ACTGCCCCTG GCGTACGACA CGCCGACGCT GAATCGCGTC
TGCGATCACA TCGACCAGGT GCAGAACACC CTCAAACGCC CGATGCTGCT GGAGAACCCG
GCAACCTATC TGGCCTTCCA GCGCTCGACG ATCGACGAAG CGGAATTCAT CCGTGAGGTC
ATCCGGCGCA CTGGCTGTGG TCTGTTGCTG GACGTGAACA ACGTCTACGT CTCGTGCATC
AACCATCAGC GCGCCCCCCT GGCTTATCTC GACGCACTGC CGCTGCACGC GGTGGGCGAG
ATTCATCTGG CGGGGTTTGC TGAAGACTCC GACAGCCTCG GTGATCGCTT GCTGATCGAT
GATCACGGCG CACCGATCGA TCAAGCCGTC TGGTCGTTGT ATCGAAAAGC GCTGGAACGT
GTCGGCCCGG TGGCGACGCT GATCGAACGG GACAATCAGG TGCCGGCCTT CAACATGCTG
TTGGCGGAAG CGCAGCAGGC CGATGAGCTA CTGCTGTGCG CGGGAGGTCG GCCATGA
 
Protein sequence
MSIMITSCDH ALRRTRAALT GLPSRAGLGL KSEHFSEVLD SRPDIGFFEV HAENYMVAGG 
PFHHFLGLIR DAYPLSLHGV GLSIGAEGAL DVQHLKRLSA LIERYQPHSF SEHLAWSSHG
PVFLNDLLPL AYDTPTLNRV CDHIDQVQNT LKRPMLLENP ATYLAFQRST IDEAEFIREV
IRRTGCGLLL DVNNVYVSCI NHQRAPLAYL DALPLHAVGE IHLAGFAEDS DSLGDRLLID
DHGAPIDQAV WSLYRKALER VGPVATLIER DNQVPAFNML LAEAQQADEL LLCAGGRP