Gene Pfl01_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1233 
Symbol 
ID3717082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1403996 
End bp1405183 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346965 
Protein GI77457460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0876385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGGTC AAAAGGACAT TCCCCGGGTT CCCAACCCAC CGGCGGGCGA CGGGCATCAC 
GTCTCCTACC GCTATATGAC GGCTACCGAA CTGGCCGATC AGCAAGACCG ACAAGACAAG
TACGACGCCA TGCTGGCGAG ACAGGACGCC TTCGAACGCA GCCGTGAGGT CGCGGCGAAC
AAGCCTGAGC CGGTGCGCGC GGGCTGCGTG TTCACCAAGT CGTGCAAGCT GCCGGACGCG
ATCATCGATT ACTCGAATCC TTCGGGGATG GTGCCGACTG ACAGTCTGAA GGATTACGGC
GAGCTGATTT TGCTCGGTGG CCGTCAGGTC GATGACAGCG GTGGGGTTGA GCTCAAGAAA
ATCAGCTGCA CGGCCATTCC TGCGGGGCTG GGCACTTTTG CCCTTGCCGG TGAGGGGTTC
AAGGCATTGC CCGCGCTGGC ATCTGCTGCA GTCATCAGCC CGTTGCTCGG TTTGGTGGCG
ATGTTCATGC CCTCGAACCT GGGCGATAGC GCTCTCTACA CCGAGGACCA GTTACTCGCC
CTCAAGCAGG CCCGAACCCG TGTGCGTCTG CGCGTTGAAC AGCAGGCCGA TGGGAACCTG
AAGGGTTATG GCTTCTACAC CGGCAAGAAT CGCGATTGGG AGATGGTTGA TGTTGTGCAG
TTCGCTGCAC GCGGTAACCG GTTTGTCGCA GACCTTGGTG AAGGTGTTGA GCTGGTCTGG
ACGCCTGCCG TGGACGGTTC CGACATCCTC GGTATTCCGG CACTGGAGGC TGCTCCGCAG
GCGCCGCATA TCTGGGTGTA TCCGCCGACG AAAGCGGCGG ACGGGATTCT GGTGAATCCG
GTTTATCCGC CGGAGTATTG GGATTTCATA TTGGTGTTTC CGGCGGAGTC CGGGGTTCGG
CCGCTGTACA TTGTTGTCAG CAAACCTGGA GACCATAAGT ACTACGATGA TCCCGAAACG
CTTCCTGCGT TCCCCGACAC TCAAAGGGTG AAGTCAAAGG CCTCAGTGCG AGGTGGTGGG
AAAAAGAGAG CCCGCTGGCT TGATGGAAAA GGCCGGATAT ATGAATGGGA CTCCAAAACC
GGCGCTATAG AGCTGTACGA CAAGCTGGGA ATTCATTTGG GAGAATTCAA TCATTTGACC
GGAGAGCGAA CAAAAAAAGC AAAGCCAGGC AGAACGACTC CCAAATAA
 
Protein sequence
MAGQKDIPRV PNPPAGDGHH VSYRYMTATE LADQQDRQDK YDAMLARQDA FERSREVAAN 
KPEPVRAGCV FTKSCKLPDA IIDYSNPSGM VPTDSLKDYG ELILLGGRQV DDSGGVELKK
ISCTAIPAGL GTFALAGEGF KALPALASAA VISPLLGLVA MFMPSNLGDS ALYTEDQLLA
LKQARTRVRL RVEQQADGNL KGYGFYTGKN RDWEMVDVVQ FAARGNRFVA DLGEGVELVW
TPAVDGSDIL GIPALEAAPQ APHIWVYPPT KAADGILVNP VYPPEYWDFI LVFPAESGVR
PLYIVVSKPG DHKYYDDPET LPAFPDTQRV KSKASVRGGG KKRARWLDGK GRIYEWDSKT
GAIELYDKLG IHLGEFNHLT GERTKKAKPG RTTPK