Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1233 |
Symbol | |
ID | 3717082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1403996 |
End bp | 1405183 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_346965 |
Protein GI | 77457460 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0876385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGGTC AAAAGGACAT TCCCCGGGTT CCCAACCCAC CGGCGGGCGA CGGGCATCAC GTCTCCTACC GCTATATGAC GGCTACCGAA CTGGCCGATC AGCAAGACCG ACAAGACAAG TACGACGCCA TGCTGGCGAG ACAGGACGCC TTCGAACGCA GCCGTGAGGT CGCGGCGAAC AAGCCTGAGC CGGTGCGCGC GGGCTGCGTG TTCACCAAGT CGTGCAAGCT GCCGGACGCG ATCATCGATT ACTCGAATCC TTCGGGGATG GTGCCGACTG ACAGTCTGAA GGATTACGGC GAGCTGATTT TGCTCGGTGG CCGTCAGGTC GATGACAGCG GTGGGGTTGA GCTCAAGAAA ATCAGCTGCA CGGCCATTCC TGCGGGGCTG GGCACTTTTG CCCTTGCCGG TGAGGGGTTC AAGGCATTGC CCGCGCTGGC ATCTGCTGCA GTCATCAGCC CGTTGCTCGG TTTGGTGGCG ATGTTCATGC CCTCGAACCT GGGCGATAGC GCTCTCTACA CCGAGGACCA GTTACTCGCC CTCAAGCAGG CCCGAACCCG TGTGCGTCTG CGCGTTGAAC AGCAGGCCGA TGGGAACCTG AAGGGTTATG GCTTCTACAC CGGCAAGAAT CGCGATTGGG AGATGGTTGA TGTTGTGCAG TTCGCTGCAC GCGGTAACCG GTTTGTCGCA GACCTTGGTG AAGGTGTTGA GCTGGTCTGG ACGCCTGCCG TGGACGGTTC CGACATCCTC GGTATTCCGG CACTGGAGGC TGCTCCGCAG GCGCCGCATA TCTGGGTGTA TCCGCCGACG AAAGCGGCGG ACGGGATTCT GGTGAATCCG GTTTATCCGC CGGAGTATTG GGATTTCATA TTGGTGTTTC CGGCGGAGTC CGGGGTTCGG CCGCTGTACA TTGTTGTCAG CAAACCTGGA GACCATAAGT ACTACGATGA TCCCGAAACG CTTCCTGCGT TCCCCGACAC TCAAAGGGTG AAGTCAAAGG CCTCAGTGCG AGGTGGTGGG AAAAAGAGAG CCCGCTGGCT TGATGGAAAA GGCCGGATAT ATGAATGGGA CTCCAAAACC GGCGCTATAG AGCTGTACGA CAAGCTGGGA ATTCATTTGG GAGAATTCAA TCATTTGACC GGAGAGCGAA CAAAAAAAGC AAAGCCAGGC AGAACGACTC CCAAATAA
|
Protein sequence | MAGQKDIPRV PNPPAGDGHH VSYRYMTATE LADQQDRQDK YDAMLARQDA FERSREVAAN KPEPVRAGCV FTKSCKLPDA IIDYSNPSGM VPTDSLKDYG ELILLGGRQV DDSGGVELKK ISCTAIPAGL GTFALAGEGF KALPALASAA VISPLLGLVA MFMPSNLGDS ALYTEDQLLA LKQARTRVRL RVEQQADGNL KGYGFYTGKN RDWEMVDVVQ FAARGNRFVA DLGEGVELVW TPAVDGSDIL GIPALEAAPQ APHIWVYPPT KAADGILVNP VYPPEYWDFI LVFPAESGVR PLYIVVSKPG DHKYYDDPET LPAFPDTQRV KSKASVRGGG KKRARWLDGK GRIYEWDSKT GAIELYDKLG IHLGEFNHLT GERTKKAKPG RTTPK
|
| |