Gene Pfl01_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1227 
Symbol 
ID3717076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1399763 
End bp1400908 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content65% 
IMG OID 
ProductBeta-lactamase 
Protein accessionYP_346959 
Protein GI77457454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGATTC AGGGCCATTA CGAGCTTCAA TTCGAAGCGG TGCGCGAAGC CTTCGCCGCA 
CTGTTCGACG ATCCCCAGGA ACGCGGCGCC GCGTTGTGCA TCCGGGTCGG CGGTGAAACC
GTCCTCGACC TCTGGTCCGG TACCGCCGAC AAGGACGGCG CCGAAGCCTG GCACAGCGAC
ACCATCGCCA ACCTGTTCTC CTGCACCAAG ACTTTCACCG CCGTCACCGC GCTGCAACTG
GTCGCCGAAG GCAAGTTGCA GCTCGATGCG CCGGTCGCCC GTTACTGGCC GGAATTCGCC
GCTGCCGGCA AGGAGTCCGT CACCCTGCGC CAACTGCTTT GCCATCAGGC CGGCTTGCCG
GCCCTGCGCG AATTGCTGGC GCCGGAAGCG CTGTATGACT GGCAAACCAT GGTCGACGCC
CTCGCGGCCG AAGCACCGTG GTGGACGCCG GGCACCGGTC ACGGCTATGC CGCGATCACC
TACGGTTGGC TGATCGGCGA ATTGCTGCGG CGTGCCGACG GTCGCGGGCC GGGGGAGTCC
ATTGTGGCAC GGGTCGCCAA ACCGCTGGGG CTGGATTTCC ATGTCGGTCT GGCCGACGAA
GAATTCCACC GAGTGGCGCA CATCGCTCGC GGCAAAGGCA ACACCGGCGA CGCCGCTGCC
CAGCGCCTGC TGCAAGTAAC CATGCGCGAG CCGACGGCCA TGACCACCCG GGCCTTCACC
AATCCGCCGT CGGTGCTCAC CAGCACCAAC AAACCGGAAT GGCGACGCAT GCAGCAACCG
GCGGCCAACG GCCACGGCAA TGCCCGCAGT CTGGCCGGGT TCTACGCCGG TCTGCTCGAC
GGCAGCCTGC TGGAAAGCGA AATGCTCGAC GAACTGACCC GTGAACACAG CCTCGGCGAG
GACAAGACCT TGCTGACCCG CACCCGTTTC GGTCTCGGTT GCATGCTCGA TCAACCCGAC
GTGCCGAACG CCACTTACGG CCTCGGCCCG CGTGCATTCG GCCATCCGGG TGCTGGCGGT
TCCATCGGTT TTGCTGATCC GGAGCACGAT GTGGCCTTCG GATTTGTGAC AAATACCCTG
GGGCCGTACG TCTTGATGGA TCCGCGCGCG CAGAAGCTGG CGCGGGTACT TGCCACTTGT
CTGTAA
 
Protein sequence
MQIQGHYELQ FEAVREAFAA LFDDPQERGA ALCIRVGGET VLDLWSGTAD KDGAEAWHSD 
TIANLFSCTK TFTAVTALQL VAEGKLQLDA PVARYWPEFA AAGKESVTLR QLLCHQAGLP
ALRELLAPEA LYDWQTMVDA LAAEAPWWTP GTGHGYAAIT YGWLIGELLR RADGRGPGES
IVARVAKPLG LDFHVGLADE EFHRVAHIAR GKGNTGDAAA QRLLQVTMRE PTAMTTRAFT
NPPSVLTSTN KPEWRRMQQP AANGHGNARS LAGFYAGLLD GSLLESEMLD ELTREHSLGE
DKTLLTRTRF GLGCMLDQPD VPNATYGLGP RAFGHPGAGG SIGFADPEHD VAFGFVTNTL
GPYVLMDPRA QKLARVLATC L