| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1213 |
|---|
| Symbol | |
|---|
| ID | 3717062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1385633 |
|---|
| End bp | 1388083 |
|---|
| Gene Length | 2451 bp |
|---|
| Protein Length | 816 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | peptidase S45, penicillin amidase |
|---|
| Protein accession | YP_346945 |
|---|
| Protein GI | 77457440 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.951411 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCGC CAGCCCTTTC ACATTTTCTT CCCCGGTTCG GCGTTGCCGC AGCAGTGGCC
GGTGTTCTGA GCCTGACCGG TTGTCAGACC TGGAACGCCC AGGACACCCT CCCGCCGACC
TCCGGTGTGC AGCCGCTCAA GGGCCTGGCG CAGAACGTTT CGGTACGCCG CAATGCCATG
GGCATGCCGC TGATCGAAAG CAACAGTTTC CACGACGCGT TGTTCGCCCT CGGCTATGTG
CACGCCAGCG ACCGGATCAA TCAGATGGTC ACCCTGCGCC TGCTGGCCCA GGGTCGTCTC
GCGGAAATGT CCGGTTCGTC GATGCTCGAC GCCGACCGCT ACATGCGCGC CGTCAACCTG
AAGAAAAGCG CCGGCGAGCT GTACAAGGCT TCGTCGCCAC GGCTCAAGCG TTTCTTCGAA
GTCTATGCCC GGGGCGTCAA CGCCTACCTG TTCCGCTACG CCGACAAGTT GCCGGGGGAT
CTGGCTTCCA GCGGCTACAA GCCTGAGTAC TGGAAACCGG AAGATTCGGC GCTGATCTTC
TGCCTGCTGA ACTTCAGCCA GTCGGCCAAC CTGCCGGAAG AAATCGCTTC GCTGGTGCTG
GCACAGACCG TGACCAACGA CAAACTGGCG TGGCTGACCC CGTCCGCTCC CGACGAAAAC
CTGCCGCTGG CCGAAGCCGA CAAGCTGCAA GGCATCAAGC TCAACGGGCA GATTCCGGGG
CTGACGGAAC TGAGCAACGC CAGCGAACAA CTGGCCGCCC TCAACCTGCT GGGCACTCAG
TCATCGAACA ACTGGGCCAT CGCCCCGCAA CGCAGCCGCA GCGGCAAGAG CCTGCTGGCC
AGCGACAGCC ATGGCCCGCT GGCCGCGCCG TCGCTGTGGA GTTTCGTGCA GATCCGCGCT
CCGAAATACC AGGCCGCCGG CGTGACCGTG GCCGGTCTGC CGATGGTGCT CGGCGGTTTC
AACGGCAAAG TGGCGTGGAG CCTGACCAGC GTGCTCGGCG ATAACCAGGA TCTGTTCCTG
GAAAAAATCC GTCGTCAGGG CAGCAGCCTG ACCTACGAGG TCAACGGCAA ATGGCAACCG
GTCGCCGTGC GCAACGAAAC CTACTTCGTC AAAGGCCAGC GGCCGATTCG CGAAGCGGTG
TACGAAACCC GCCATGGCGC GCTGCTCAAC AGCACCCAGG CTGCCGCTCA GGGCACAGGT
TTTGGCCTGG CCTTGCAGAC GCCGAGCTTC ACCGACGACA AATCACTCGA TGCGTTTTTC
GATCTGAGCC GCGCGCAGAA CGTGGAACGC GCCTCGGACG CCACCCGGGA AATCCGCGCC
ATCGCGCTGA ATCTGGTGTT TGCCGACGCC AGCAACATTG GCTGGCAAGT CACCGGGCGC
TTCCCGAACC GCCGTGAAGG TGAAGGTTTG CTGCCGTCGC CGGGCTGGGA AGGTCGCTAC
GACTGGGACG GTTACGCCGA CCCGATGCTC CACCCCTACG ATCAGGACCC GGCCCAGGGC
TGGCTCGGCA CCGCCAACCA GCGGGTCATT CCCCACGGCT ACGGCATGCA ACTGTCCAAT
TCCTGGGCAG CGCCGGAGCG TGGCGAGCGC CTGGCCGAAC TGGCCGGCAG CGGCAAGCAT
GACAGTCGCA GCGTGATTGC CATGCAGTAC GACCAGACCA CCACCTTCGC CGCCAAACTG
AAGAAAATGT TTGAAGCACC GGGCATGGCG CAGCCGCTGA AACAGGCGAT CGACGCACTG
CCGGAAGCCG AGCGCAGCAA GGCCCGCGAG GCCTACACCC GTCTGATGGC GTTCGACGGC
AAGCTCAGCC CGACCTCCGC CGACGCGGCG ATCTACGAGC TGTTCCTGCA GGAAAGCATG
AAGCAGATCT TCCTCGACGA ACTCGGCCCG CAAAACAGTC CGGCGTGGAA AGCGTTCATC
GCCAATGGCG ACTTGTCCTA CGCCGCCCAG GCCGATCACT TGCTCGGCCG CGAAGACAGT
CCGTTCTGGG ACGACGCCCG CACCCCGCAA AAAGAAGACA AACCGGCGAT CCTCGCTCGC
AGTCTGGCAG CAGCGATCAG CGCTGGCGAC AGTCAGTTGG GCGGTGATCG CAGAGCCTGG
CAGTGGGGCA AACTGCACCG CTACGAGTGG AAGAATGCCA ACGGCCAGAG CGTTCGCGGT
CCGATCGCGG CGGGCGGTGA CCATACCACC CTGAACACGG CGGCATTTGC CTGGGGCCAG
GACTTCAACA CCACGCGTGC GCCGTCGATG CGCTTTATCG TCGACTTCGG TCAGAGCGAA
CCGCTGATGG GGCAGAACGG GACGGGGCAA TCGGGGAATC CGGTGAGCCC GAACTACCTG
AACGGCATCG ACCCGTGGCT CAAGGGCCAG TACATCGGCT TGCCGATGCA GCCGCAGAAC
TTTGACCGGG TGTATGGCAA GACGCGGTTG ACGCTTACCC CCGGCAAATA A
|
|---|
| Protein sequence | MASPALSHFL PRFGVAAAVA GVLSLTGCQT WNAQDTLPPT SGVQPLKGLA QNVSVRRNAM
GMPLIESNSF HDALFALGYV HASDRINQMV TLRLLAQGRL AEMSGSSMLD ADRYMRAVNL
KKSAGELYKA SSPRLKRFFE VYARGVNAYL FRYADKLPGD LASSGYKPEY WKPEDSALIF
CLLNFSQSAN LPEEIASLVL AQTVTNDKLA WLTPSAPDEN LPLAEADKLQ GIKLNGQIPG
LTELSNASEQ LAALNLLGTQ SSNNWAIAPQ RSRSGKSLLA SDSHGPLAAP SLWSFVQIRA
PKYQAAGVTV AGLPMVLGGF NGKVAWSLTS VLGDNQDLFL EKIRRQGSSL TYEVNGKWQP
VAVRNETYFV KGQRPIREAV YETRHGALLN STQAAAQGTG FGLALQTPSF TDDKSLDAFF
DLSRAQNVER ASDATREIRA IALNLVFADA SNIGWQVTGR FPNRREGEGL LPSPGWEGRY
DWDGYADPML HPYDQDPAQG WLGTANQRVI PHGYGMQLSN SWAAPERGER LAELAGSGKH
DSRSVIAMQY DQTTTFAAKL KKMFEAPGMA QPLKQAIDAL PEAERSKARE AYTRLMAFDG
KLSPTSADAA IYELFLQESM KQIFLDELGP QNSPAWKAFI ANGDLSYAAQ ADHLLGREDS
PFWDDARTPQ KEDKPAILAR SLAAAISAGD SQLGGDRRAW QWGKLHRYEW KNANGQSVRG
PIAAGGDHTT LNTAAFAWGQ DFNTTRAPSM RFIVDFGQSE PLMGQNGTGQ SGNPVSPNYL
NGIDPWLKGQ YIGLPMQPQN FDRVYGKTRL TLTPGK
|
|---|
| |