Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1211 |
Symbol | |
ID | 3717060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1382705 |
End bp | 1384393 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | ATP-dependent DNA ligase |
Protein accession | YP_346943 |
Protein GI | 77457438 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.837533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACT TCGCCGGGTT GTACGCCGAA CTCGACGCCA CCACCTCCAG CAACGCCAAA CTGGCGGCCA TGCAAACCTA CTTCGCCCAG GCGCAACCGC AGGATGCCGC TTGGGCGGTG TACTTCTTGT CCGGCGGTCG GCCGCGGCAA CTGGTGCCGG TGCGGATCCT GCGCGATCTC GCGGTCGAAA TGTCCGGGTT GGCGCCATGG CTGTTCGAGG AGAGCTATCA AGCGGTCGGC GACCTGGCGG AAACCATCTC GCTGGTGTTG CCGGAACATC CATACACCTC CGAGGCCGGC CTCGCCGAAT GGATCGAAGA CAAACTGCTG CCCCTGCGCG GTGAAACCCC GGAATACCTC GCCCATCAGT TGCCCGCACT GTGGGCGCAA CTGGATCGGC CGAGCCTGAT GCTGTGCATC AAGTTGATCA CCGGCAGCTT CCGGGTCGGC GTATCCAAGC TGCTGGTGAC CCGCGCTCTG GCTTCCATGG CCGGGCTCGA CAGCAAGCGA GTGGCGCAAC GGCTGGTGGG TTACACCGAC CTGTCCAACC GGCCGAACGC TGCCAGTTAC CTGAAACTGA TCGCCCCCGA ATCCAGCGAC GAGCATGCCC AGCGCGGCGG CCAGCCCTAC CCGTTCTTCC TCGCCCACGC GCTGGCGCAA CCGGTGGAAA CCTTCGAAGC CCTGCTCGGG CCTGCCAGTA ACTGGCAGGT GGAATGGAAG TGGGATGGCA TTCGCGCGCA AGTGGTCAAG CGCGACGGAA AACTGTGGGT CTGGTCCCGG GGCGAAGAAC TGGTCACCGA ACGCTTTCCC GAACTCGACA CACTGGTGCA CGGGTTGCCC GACGGCACGG TGATCGACGG CGAAATCGTG GTCTGGAAAA ACCGGCGCCC GGTCACCGAA GATGCTTTCG ATCCGCAGTC GACAGAAGCT CCGGCGGTGC AACCCTTCGC GCTGTTGCAG CAACGGATTG GCCGTAAATC GCTGGACCGG AAAATCCTTG AAGACGCGCC GGTGGTGGTA CTCGCCTATG ACCTGCTCGA ATGGCAGGGC GAAGACTGGC GCAACCAGCC CCAGGCCAGA CGTCGTGAGC AACTGGAGCA GGTCATCGCC CGCTGCAACA ACCCGGTGCT GCTGCCTTCG CCGATTCTGA CGGGTGATGA CTGGTTCGAC CTCGCCCGCC AGCGCGAAGC CTCCAGACGC CTGGGGGTCG AAGGCATGAT GCTCAAGGCC AGGGATGCGA TGTATGGCGT CGGTCGCACC AAGGACATGG GCGTGTGGTG GAAATGGAAG GTCGACCCGT TCAGCGTCGA CGCGGTGCTG ATCTACGCCC AGCGCGGTCA TGGCCGGCGC GCCAGCCTCT ACAGCGATTA CACCTTTGCG GTGTGGGACG GCCCGCCCGG TGCCAGTGCG CGGGCGTTGG TGCCCTTCGC CAAGGCCTAT TCTGGGCTGA CCGACGCGGA AATGCGCGAA GTCGACAGCA TCGTGCGCAA GACCACCGTG GAAAAATTCG GTCCGGTCAG CAGCGTGAAG CCGAGCCTTG TGTTCGAACT GGGTTTCGAA GGCATCGCCC TCTCCCGTCG GCACAAGAGC GGCATCGCCG TGCGCTTCCC GCGCATGCTG CGCTGGCGCC AGGACAAGAC CGTGGACGAG GCCGACAGCC TGGCGACCCT GCAAAACCTG TTGGTCTGA
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Protein sequence | MKDFAGLYAE LDATTSSNAK LAAMQTYFAQ AQPQDAAWAV YFLSGGRPRQ LVPVRILRDL AVEMSGLAPW LFEESYQAVG DLAETISLVL PEHPYTSEAG LAEWIEDKLL PLRGETPEYL AHQLPALWAQ LDRPSLMLCI KLITGSFRVG VSKLLVTRAL ASMAGLDSKR VAQRLVGYTD LSNRPNAASY LKLIAPESSD EHAQRGGQPY PFFLAHALAQ PVETFEALLG PASNWQVEWK WDGIRAQVVK RDGKLWVWSR GEELVTERFP ELDTLVHGLP DGTVIDGEIV VWKNRRPVTE DAFDPQSTEA PAVQPFALLQ QRIGRKSLDR KILEDAPVVV LAYDLLEWQG EDWRNQPQAR RREQLEQVIA RCNNPVLLPS PILTGDDWFD LARQREASRR LGVEGMMLKA RDAMYGVGRT KDMGVWWKWK VDPFSVDAVL IYAQRGHGRR ASLYSDYTFA VWDGPPGASA RALVPFAKAY SGLTDAEMRE VDSIVRKTTV EKFGPVSSVK PSLVFELGFE GIALSRRHKS GIAVRFPRML RWRQDKTVDE ADSLATLQNL LV
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