Gene Pfl01_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1210 
Symbol 
ID3717059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1381589 
End bp1382371 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content55% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_346942 
Protein GI77457437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.671238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CATTGCTGAC CCTTTCTGCA CTGGCGTTGT GCATGGCCGC CGGCTCCGCG 
CTGGCCAAGG AATACAAAGA ACTGCGGTTT GGCGTTGACC CTTCCTACGC ACCGTTCGAG
TCGAAAGCGG CAGACGGCAG CCTGGTTGGC TTCGACATCG ATCTGGGCAA CGCGATCTGC
GCCGAGCTGA AGGTCAAGTG CAAATGGGTC GAAAGTGACT TCGACGGTAT GATTCCGGGC
CTCAAGGCCA ATAAATTCGA CGGTGTGATC TCGTCGATGA CCGTTACCGA AGCCCGTGAA
AAAGTCATCG ACTTCTCCAG CGAGCTGTTC TCCGGCCCGA CGGCCTACGT GTCGAAAAAA
GGTTCGGGCA TCACCGACGA CGTCGCTTCC CTGAAAGGCA AAACCGTCGG CTACGAGCAA
GGCACCATCC AGGAAGCCTA TGCCAAAGCC GTGCTGGACA AGGCCGGCGT GAAAACCCAG
GCCTATCAAA ATCAGGACCA GGTGTATTCC GACCTGACCT CGGGCCGTCT CGATGCGGGC
ATTCAGGACA TGTTGCAGGC CGAACTGGGC TTTCTGAAGT CGCCGCAAGG CGCTGATTAT
GAAGTCAGCA AGCCGGTCGA CAACCACTTG CTGCCAGCCA AGACCGCTGT CGGTATTAAG
AAAGGTAACA CCGAGCTGAA AGCGCTTTTG GATAAAGGTA TCAAAGCGTT ACACGATGAC
GGCAAATACG CCGAGATTCA AAAGAAACAC TTTGGCGATC TGAATCTGTA CAGCGGCAAA
TAA
 
Protein sequence
MKKALLTLSA LALCMAAGSA LAKEYKELRF GVDPSYAPFE SKAADGSLVG FDIDLGNAIC 
AELKVKCKWV ESDFDGMIPG LKANKFDGVI SSMTVTEARE KVIDFSSELF SGPTAYVSKK
GSGITDDVAS LKGKTVGYEQ GTIQEAYAKA VLDKAGVKTQ AYQNQDQVYS DLTSGRLDAG
IQDMLQAELG FLKSPQGADY EVSKPVDNHL LPAKTAVGIK KGNTELKALL DKGIKALHDD
GKYAEIQKKH FGDLNLYSGK