Gene Pfl01_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1207 
Symbol 
ID3717056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1378966 
End bp1380084 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content65% 
IMG OID 
Productsuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_346939 
Protein GI77457434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.620261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCATC AGATACACGA CCTGCTGGCC CCGCTGCCGG GGACCGCACG ACAGATCCAC 
AGCTTTCATT TTGGCCCGGA CAAGGCCCAA GGCAAGATCT ACATCCAGTC TTCGCTGCAC
GCCGACGAAC TGCCCGGCAT GCTCGTGGCC TGGCACCTCA AACAGCGCCT GGCGGAGCTG
GAAGCCGCCG GCCGCCTGCG CAGCGAAATC GTGCTGGTGC CGGTGGCCAA CCCGGTCGGC
CTCGAACAGG TGCTGATGGA TGTGCCGCTG GGCCGCTACG AATTGGAGAG CGGGCAGAAC
TTCAACCGCT GGTTCGTCGA CCTCAGCGAG GAAATCGGCA ACGAGATCGA AACACAGCTG
TGCGACGACC CGCAGCGCAA CCTTGAGCTG ATCCGCGCCA GCCTGCGCAA TGCCCTCGCC
CGCCAGACCG CCAGCACCCA ACTGCAATCC CAGCGCCTGA CCCTGCAACG GCTGGCGTGC
GATGCGGACA TGGTGCTCGA CTTGCATTGC GATTTCGAAT CCGTGGTTCA CCTCTACACC
ACGCCCGAGG CCTGGCCGCA GGTCGAGCCG CTGGCGCGTT ATATCGAATC CCAGGCGAGC
CTGTTGGCCA CCGACTCCGG CGGCCAGTCG TTCGACGAGT GCTTCACCCT GCTGTGGTGG
CAATTGAAGG AGCGCTTCGG CGACCACTTC GAGATTCCAC TGGGCAGTTT CTCGGTCACC
GTCGAGTTGC GCGGCCAGGG GGATGTCACC CATCCGCTGG CCAGTCGCGA TTGCCAGGCG
CTGATCGATT ACCTGATCCA TTTCGGCGCC ATCGTCGGCG AACCCAAAGC CTTGCCGGCC
CTGCCACATC CCGCCACACC GCTGGCCGGT GTGGAACCGG TGGCCACTCC TGTCGGCGGG
CTACTGGTGT ACAGCGCCAC GCCCGGCCAG CTTCTGGAAG CCGGGCAGAA AATCGCCGAA
ATCATCGACC CGATCAGCGA CCGGGTCACG CCAGTCCATT GCACCGCTTC CGGTCTGCTC
TATGCCCGCT CGTTGCGGCG CATGGCCACC GCCGGGATGG TGATCGCCCA CGTCGCGGGC
GCCGAAGCCT ATCGCAGCGG CTATCTACTT TCGCCTTGA
 
Protein sequence
MRHQIHDLLA PLPGTARQIH SFHFGPDKAQ GKIYIQSSLH ADELPGMLVA WHLKQRLAEL 
EAAGRLRSEI VLVPVANPVG LEQVLMDVPL GRYELESGQN FNRWFVDLSE EIGNEIETQL
CDDPQRNLEL IRASLRNALA RQTASTQLQS QRLTLQRLAC DADMVLDLHC DFESVVHLYT
TPEAWPQVEP LARYIESQAS LLATDSGGQS FDECFTLLWW QLKERFGDHF EIPLGSFSVT
VELRGQGDVT HPLASRDCQA LIDYLIHFGA IVGEPKALPA LPHPATPLAG VEPVATPVGG
LLVYSATPGQ LLEAGQKIAE IIDPISDRVT PVHCTASGLL YARSLRRMAT AGMVIAHVAG
AEAYRSGYLL SP