Gene Pfl01_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1198 
Symbol 
ID3716970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1370256 
End bp1371815 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content63% 
IMG OID 
ProductAmpG permease 
Protein accessionYP_346930 
Protein GI77457425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.1584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTA AAACCTGGCG CGCCGCGCTC GCCGCCTATG CCAGTCCTTC GACGCTCGTG 
CTGTTGTTGC TGGGTTTCGC CGCCGGCCTG CCGTACATGC TGGTGTTCTC GACACTTTCG
GTCTGGCTGC GTGAAGCCGG TGTGGCCCGC GAGACGATCG GCTACGCCAG CCTGATCGGT
CTGGCCTACG CCTTCAAATG GGTCTGGTCG CCCCTGCTCG ACCAATGGCG CCTGCCGTTG
CTCGGCAAGC TGGGTCGTCG CCGTTCGTGG CTGGTACTTT CACAAACGCT GGTGATCCTC
GGTCTGATCG GCATGGGCTT TTGCGACCCG CAAAAACACC TGTCCTGGCT GATCGCTATC
GCGGTGGTGG TTGCATTCGC CTCCGCCACT CAGGATATCG CCGTCGACGC CTATCGCCTG
GAAATCGCCG AAGACAGCCG TCAGGCCGCG CTGGCCGCCA GCTATATGTC CGGCTATCGG
ATCGCCGCCC TGCTCGCGAC CGCGGGTGCG CTGTTCTTCG CCGAGGGCTT CGGCTCTACA
GGATTCAAGT ACCAGCATTC GGCCTGGACC GGCACCTACG TGCTGTTCGG CGCCCTGATG
GTCCCTGCCC TGCTCACCAC TCTGCTGATG CGCGAGCCGC CGGTGCCGTT GCGCACCCAG
TTGCAGGCGG GGCGTTACAC CTTCATGCAT CAGTTGATGT CGGTATTCGT GCTGATCATT
TTGCTGGTCT CCGTACCGGC CATGTTCACC CAGCTCTACA ACACCGATTT CGCCAGCGTG
CTGTTTGGCG ACATGAGCCC GCTGGACCTG CTGCTGGAAG ACCGGGCGTT CCTGCGTGCC
ATTCTCTACA CCACGCTGAC CTGCCTGTGC CTCTCGGCCA TGGGCCGTCG CGGTCTGGCG
CCGGTGCTGA CACCGGTCAA CGACTTCATC CTGCGCTACC GCTGGCAGGC ACTGCTGCTG
CTGGGCCTGA TCGCCACCTA TCGGATGTCC GACACGGTGA TGGGCGTGAT GGCCAACGTG
TTCTACATCG ACCAGGGTTT CACCAAGGAC CAGATCGCCA GCGTCAGCAA GATCTTCGGT
CTGATCATGA CCCTCGTCGG CGCCGGCATG GGCGGCCTGC TGATCGTGCG CTTCGGCATC
CTGCCGATCC TGTTCATCGG CGGCGCCGCG TCGGCGGGCA CCAATCTGCT GTTCCTGATG
CTGGCCGACA TGGGCCCGAA CCTGCAGATG CTGGTGGTGA CGATTTCCCT CGACAACTTC
AGTTCGGGCC TGGCCACGTC GGCGTTCGTC GCCTACCTGT CGAGCCTGAC CAACCTGAAG
TTCTCCGCCA CCCAGTACGC CCTGCTCAGC TCGATCATGC TCCTGCTGCC ACGCCTGATC
GGCGGCTACT CCGGGGTGAT GGTGGAGAAA TTCGGTTATC ACAACTTTTT CCTCATCACC
GCGCTGCTCG GCGTTCCGAC CCTGGTGCTG ATCGCCCTGC ACTGGTTCCA GGAAAGCCGC
CGCGAAGGCC CGACGCCGAC CCCGGAACCT GCACCGACCT CCGTCGTGGA AGAATCGTAA
 
Protein sequence
MPRKTWRAAL AAYASPSTLV LLLLGFAAGL PYMLVFSTLS VWLREAGVAR ETIGYASLIG 
LAYAFKWVWS PLLDQWRLPL LGKLGRRRSW LVLSQTLVIL GLIGMGFCDP QKHLSWLIAI
AVVVAFASAT QDIAVDAYRL EIAEDSRQAA LAASYMSGYR IAALLATAGA LFFAEGFGST
GFKYQHSAWT GTYVLFGALM VPALLTTLLM REPPVPLRTQ LQAGRYTFMH QLMSVFVLII
LLVSVPAMFT QLYNTDFASV LFGDMSPLDL LLEDRAFLRA ILYTTLTCLC LSAMGRRGLA
PVLTPVNDFI LRYRWQALLL LGLIATYRMS DTVMGVMANV FYIDQGFTKD QIASVSKIFG
LIMTLVGAGM GGLLIVRFGI LPILFIGGAA SAGTNLLFLM LADMGPNLQM LVVTISLDNF
SSGLATSAFV AYLSSLTNLK FSATQYALLS SIMLLLPRLI GGYSGVMVEK FGYHNFFLIT
ALLGVPTLVL IALHWFQESR REGPTPTPEP APTSVVEES