Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1194 |
Symbol | |
ID | 3716964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1362787 |
End bp | 1365426 |
Gene Length | 2640 bp |
Protein Length | 879 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_346926 |
Protein GI | 77457421 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.685135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0802635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCA ACTCGTCTGA TTCACAAGAC ACCATCACAG CGAACCCACC GATCAAGCCT GAGCGTCTGC GCCTGCTGGA TCGGATCAGC AAATACCGGC AACCGATCGG TCTGGCGGTC ACTTTGCTGC TGTTCGCCAT CGCGCTGATT GCCTGTCGCC ATCTGCTCAG CGAACTCGAT CTCGACGCCC TGCACGACTC GATACTCGAC GTGCCGAAAC CGGCCCTGCT CGGTGCCCTC GGTGCGACGG TCGTCGGCTT CATTATCCTG CTCGGCTATG AATGGTCGGC CAGTCGATAT GCCCGCGTGA CGCTGGCGCC GAAAGTGCTG GCACTGGGCG GTTTCACCGC GTTTGCCATC GGCAACGCCA TCGGCCTGTC GATGCTGTCC GGTGGCTCGG TGCGTTACCG TTTATATGCA CGACATGGCC TGGGCGCTTC CGAAGTCGCG CACATGACCC TGTTCGCCAG CCTGTCGCTG GGCTGCGCCC TGCCGCCGCT GGCTGCGCTT GCGACCCTGA GCAACCTGCC CGCCGCGTCA CAGGCCCTGG GGCTGTCCGA GACCTTGTTG GGCACGATTG CCGGCGTGGT GCTGCTGCTC GGCGCGATCC TGGCCATCGG CATCTATCGC CGTCGCCTGC CGGAACAACC CTATCCGGAC AACCTGTTGG TCCGGGCCGG TCGCCGCACC CTGCGCCTGC CGGGTCGCCG CCTGACCTTC CTGCAACTGG TCATCACCGC CCTCGACGTC GCCGCTGCTG CGACCGTCCT TTATCTGCTG CTGCCGGAAG CGCCACCCTT CGGTGCATTC CTGCTGGTTT ATCTGCTGGC GCTGGCGGCC GGCGTGCTCA GTCACGTTCC GGGTGGCGTG GGCGTCTTTG AAGCAATTCT GCTGGCCGCG TTCGCCGACA AGCTCGGCGC CGCGCCACTG GCTGCTGCCC TGCTCCTGTA TCGCCTGATC TATGTGGTGC TGCCGTTGCT GGTGGCCTGC GTGCTGCTGC TGATCAATGA AGGCCAGCGC CTGTTTCAGT CGCAGACCAT GCGTGCGGCT TCCGGTCTGG CGGCACCGAT TCTCGCGGTG CTGGTGTTCC TGTCCGGCGT GGTGCTGCTG TTTTCCGGGG CGACGCCAGA GATCGACACC CGTCTTGAAC ACATCGGTTT TCTGATTCCC CACCGTCTGG TCGATGCTTC GCACTTTGGC GCCAGCCTGA TCGGCGTGCT GTGCCTGATG CTCGCTCAAG GCCTGCGTCG CCGGTTGTCG GCGGCGTGGA TGCTGACCAC CATTCTGTTG CTGGTGGGCG CCCTGCTCTC GCTGCTCAAG GGTTTCGACT GGGAAGAAGC GACCCTGATG ACCCTCACCG CCGCGCTGCT GGGGGTGTTC CGCCGTTCGT TCTACCGCCC GAGCCGCCTC ACCGAACTGC CGTTCTCGCC GCTGTATCTG GTGGCCAGCC TGTGCGTACT CGGTGCCTCG ACCTGGCTTT TGCTGTTCGC TTATCAGGAC GTTCCTTACA GCCATCAACT GTGGTGGCAG TTCACTCTCG ACGCCGACGC CCCGCGCGGC CTGCGCTCGC TGCTCGGCGC CGCTGTGTTG CTGCTGGTGA TCGCTCTGAC CTGGCTGCTG CGCACCGCCC GCCCGGTGAT TCACCTGCCG ACACCGGACG AACTGGAACG CGCCTCGAAA ATTCTGATGG CTTCCTCGCA ACCGGACGGC GGCCTGGCCC TGACCGGTGA CAAGGCGCTG CTGTTTCATC CCAACGACGA AGCCTTCCTG ATGTACGCCC GTCGCGGCCG CAGTCTGGTG GCCCTGTACG ACCCGATCGG CCCCGGCCAG CAACGGGCCG AGATGATCTG GCAGTTCCGC GACCTGTGCG ACATCCATCA CGCCCGCCCG GTGTTCTATC AGGTGCGCGC CGAGAACCTG CCGTACTACA TGGACATCGG CCTGACCGCG ATCAAGCTGG GCGAGGAAGC CCGGGTCGAT CTGCATCGCT TTGACCTGGA AGCCAAGGGC AAGGAGATGA AGGACCTGCG CTACACCTGG AACCGTGGCA CCCGCGACGG CCTGTCGCTG GAAATCCATG AGCCGGGCCA GGCGCCGATG GATGAGCTCA AGGTGATTTC CGACGCCTGG CTGACCGGCA AGAACGTGCG CGAGAAAGGC TTCTCCCTCG GCCGCTTCAG CGACGATTAC CTGAAGCATT TCCGCATCGC GGTGATTCGC TTCGAAGGGC GTCCGGTGGC GTTCGCCAAC CTGCTCGAGA CCTACAGCCA TGACCTGGCC AGTCTCGACC TGATGCGCGC GCACCCGGAC GCCCCCAAAC TGACCATGGA ATTCATGATG GTCGGTCTGA TTCAACACTA TAAGAGTCAC GGATACGCGC GCTTCAGCCT GGGCATGGTG CCGCTGTCGG GGTTGCAACC CCGGCGCGGG GCACCGCTGA CCCAGCGTCT GGGTTCGATG GTTTTCCGCC GTGGTGAGCA GCTGTACAAC TTCCAAGGCT TGCGCCGCTT CAAAGACAAG TTCCAGCCTG ACTGGGAACC CCGTTATATG GCAGTGCCCG CCGGACTCGA TCCGCTGGTG GCACTGGCCG ATACTGCTGC CCTGATCGCG GGCGGCTTGA CTGGATTGGT GAAACGCTGA
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Protein sequence | MRANSSDSQD TITANPPIKP ERLRLLDRIS KYRQPIGLAV TLLLFAIALI ACRHLLSELD LDALHDSILD VPKPALLGAL GATVVGFIIL LGYEWSASRY ARVTLAPKVL ALGGFTAFAI GNAIGLSMLS GGSVRYRLYA RHGLGASEVA HMTLFASLSL GCALPPLAAL ATLSNLPAAS QALGLSETLL GTIAGVVLLL GAILAIGIYR RRLPEQPYPD NLLVRAGRRT LRLPGRRLTF LQLVITALDV AAAATVLYLL LPEAPPFGAF LLVYLLALAA GVLSHVPGGV GVFEAILLAA FADKLGAAPL AAALLLYRLI YVVLPLLVAC VLLLINEGQR LFQSQTMRAA SGLAAPILAV LVFLSGVVLL FSGATPEIDT RLEHIGFLIP HRLVDASHFG ASLIGVLCLM LAQGLRRRLS AAWMLTTILL LVGALLSLLK GFDWEEATLM TLTAALLGVF RRSFYRPSRL TELPFSPLYL VASLCVLGAS TWLLLFAYQD VPYSHQLWWQ FTLDADAPRG LRSLLGAAVL LLVIALTWLL RTARPVIHLP TPDELERASK ILMASSQPDG GLALTGDKAL LFHPNDEAFL MYARRGRSLV ALYDPIGPGQ QRAEMIWQFR DLCDIHHARP VFYQVRAENL PYYMDIGLTA IKLGEEARVD LHRFDLEAKG KEMKDLRYTW NRGTRDGLSL EIHEPGQAPM DELKVISDAW LTGKNVREKG FSLGRFSDDY LKHFRIAVIR FEGRPVAFAN LLETYSHDLA SLDLMRAHPD APKLTMEFMM VGLIQHYKSH GYARFSLGMV PLSGLQPRRG APLTQRLGSM VFRRGEQLYN FQGLRRFKDK FQPDWEPRYM AVPAGLDPLV ALADTAALIA GGLTGLVKR
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