Gene Pfl01_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1194 
Symbol 
ID3716964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1362787 
End bp1365426 
Gene Length2640 bp 
Protein Length879 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346926 
Protein GI77457421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.685135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0802635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCA ACTCGTCTGA TTCACAAGAC ACCATCACAG CGAACCCACC GATCAAGCCT 
GAGCGTCTGC GCCTGCTGGA TCGGATCAGC AAATACCGGC AACCGATCGG TCTGGCGGTC
ACTTTGCTGC TGTTCGCCAT CGCGCTGATT GCCTGTCGCC ATCTGCTCAG CGAACTCGAT
CTCGACGCCC TGCACGACTC GATACTCGAC GTGCCGAAAC CGGCCCTGCT CGGTGCCCTC
GGTGCGACGG TCGTCGGCTT CATTATCCTG CTCGGCTATG AATGGTCGGC CAGTCGATAT
GCCCGCGTGA CGCTGGCGCC GAAAGTGCTG GCACTGGGCG GTTTCACCGC GTTTGCCATC
GGCAACGCCA TCGGCCTGTC GATGCTGTCC GGTGGCTCGG TGCGTTACCG TTTATATGCA
CGACATGGCC TGGGCGCTTC CGAAGTCGCG CACATGACCC TGTTCGCCAG CCTGTCGCTG
GGCTGCGCCC TGCCGCCGCT GGCTGCGCTT GCGACCCTGA GCAACCTGCC CGCCGCGTCA
CAGGCCCTGG GGCTGTCCGA GACCTTGTTG GGCACGATTG CCGGCGTGGT GCTGCTGCTC
GGCGCGATCC TGGCCATCGG CATCTATCGC CGTCGCCTGC CGGAACAACC CTATCCGGAC
AACCTGTTGG TCCGGGCCGG TCGCCGCACC CTGCGCCTGC CGGGTCGCCG CCTGACCTTC
CTGCAACTGG TCATCACCGC CCTCGACGTC GCCGCTGCTG CGACCGTCCT TTATCTGCTG
CTGCCGGAAG CGCCACCCTT CGGTGCATTC CTGCTGGTTT ATCTGCTGGC GCTGGCGGCC
GGCGTGCTCA GTCACGTTCC GGGTGGCGTG GGCGTCTTTG AAGCAATTCT GCTGGCCGCG
TTCGCCGACA AGCTCGGCGC CGCGCCACTG GCTGCTGCCC TGCTCCTGTA TCGCCTGATC
TATGTGGTGC TGCCGTTGCT GGTGGCCTGC GTGCTGCTGC TGATCAATGA AGGCCAGCGC
CTGTTTCAGT CGCAGACCAT GCGTGCGGCT TCCGGTCTGG CGGCACCGAT TCTCGCGGTG
CTGGTGTTCC TGTCCGGCGT GGTGCTGCTG TTTTCCGGGG CGACGCCAGA GATCGACACC
CGTCTTGAAC ACATCGGTTT TCTGATTCCC CACCGTCTGG TCGATGCTTC GCACTTTGGC
GCCAGCCTGA TCGGCGTGCT GTGCCTGATG CTCGCTCAAG GCCTGCGTCG CCGGTTGTCG
GCGGCGTGGA TGCTGACCAC CATTCTGTTG CTGGTGGGCG CCCTGCTCTC GCTGCTCAAG
GGTTTCGACT GGGAAGAAGC GACCCTGATG ACCCTCACCG CCGCGCTGCT GGGGGTGTTC
CGCCGTTCGT TCTACCGCCC GAGCCGCCTC ACCGAACTGC CGTTCTCGCC GCTGTATCTG
GTGGCCAGCC TGTGCGTACT CGGTGCCTCG ACCTGGCTTT TGCTGTTCGC TTATCAGGAC
GTTCCTTACA GCCATCAACT GTGGTGGCAG TTCACTCTCG ACGCCGACGC CCCGCGCGGC
CTGCGCTCGC TGCTCGGCGC CGCTGTGTTG CTGCTGGTGA TCGCTCTGAC CTGGCTGCTG
CGCACCGCCC GCCCGGTGAT TCACCTGCCG ACACCGGACG AACTGGAACG CGCCTCGAAA
ATTCTGATGG CTTCCTCGCA ACCGGACGGC GGCCTGGCCC TGACCGGTGA CAAGGCGCTG
CTGTTTCATC CCAACGACGA AGCCTTCCTG ATGTACGCCC GTCGCGGCCG CAGTCTGGTG
GCCCTGTACG ACCCGATCGG CCCCGGCCAG CAACGGGCCG AGATGATCTG GCAGTTCCGC
GACCTGTGCG ACATCCATCA CGCCCGCCCG GTGTTCTATC AGGTGCGCGC CGAGAACCTG
CCGTACTACA TGGACATCGG CCTGACCGCG ATCAAGCTGG GCGAGGAAGC CCGGGTCGAT
CTGCATCGCT TTGACCTGGA AGCCAAGGGC AAGGAGATGA AGGACCTGCG CTACACCTGG
AACCGTGGCA CCCGCGACGG CCTGTCGCTG GAAATCCATG AGCCGGGCCA GGCGCCGATG
GATGAGCTCA AGGTGATTTC CGACGCCTGG CTGACCGGCA AGAACGTGCG CGAGAAAGGC
TTCTCCCTCG GCCGCTTCAG CGACGATTAC CTGAAGCATT TCCGCATCGC GGTGATTCGC
TTCGAAGGGC GTCCGGTGGC GTTCGCCAAC CTGCTCGAGA CCTACAGCCA TGACCTGGCC
AGTCTCGACC TGATGCGCGC GCACCCGGAC GCCCCCAAAC TGACCATGGA ATTCATGATG
GTCGGTCTGA TTCAACACTA TAAGAGTCAC GGATACGCGC GCTTCAGCCT GGGCATGGTG
CCGCTGTCGG GGTTGCAACC CCGGCGCGGG GCACCGCTGA CCCAGCGTCT GGGTTCGATG
GTTTTCCGCC GTGGTGAGCA GCTGTACAAC TTCCAAGGCT TGCGCCGCTT CAAAGACAAG
TTCCAGCCTG ACTGGGAACC CCGTTATATG GCAGTGCCCG CCGGACTCGA TCCGCTGGTG
GCACTGGCCG ATACTGCTGC CCTGATCGCG GGCGGCTTGA CTGGATTGGT GAAACGCTGA
 
Protein sequence
MRANSSDSQD TITANPPIKP ERLRLLDRIS KYRQPIGLAV TLLLFAIALI ACRHLLSELD 
LDALHDSILD VPKPALLGAL GATVVGFIIL LGYEWSASRY ARVTLAPKVL ALGGFTAFAI
GNAIGLSMLS GGSVRYRLYA RHGLGASEVA HMTLFASLSL GCALPPLAAL ATLSNLPAAS
QALGLSETLL GTIAGVVLLL GAILAIGIYR RRLPEQPYPD NLLVRAGRRT LRLPGRRLTF
LQLVITALDV AAAATVLYLL LPEAPPFGAF LLVYLLALAA GVLSHVPGGV GVFEAILLAA
FADKLGAAPL AAALLLYRLI YVVLPLLVAC VLLLINEGQR LFQSQTMRAA SGLAAPILAV
LVFLSGVVLL FSGATPEIDT RLEHIGFLIP HRLVDASHFG ASLIGVLCLM LAQGLRRRLS
AAWMLTTILL LVGALLSLLK GFDWEEATLM TLTAALLGVF RRSFYRPSRL TELPFSPLYL
VASLCVLGAS TWLLLFAYQD VPYSHQLWWQ FTLDADAPRG LRSLLGAAVL LLVIALTWLL
RTARPVIHLP TPDELERASK ILMASSQPDG GLALTGDKAL LFHPNDEAFL MYARRGRSLV
ALYDPIGPGQ QRAEMIWQFR DLCDIHHARP VFYQVRAENL PYYMDIGLTA IKLGEEARVD
LHRFDLEAKG KEMKDLRYTW NRGTRDGLSL EIHEPGQAPM DELKVISDAW LTGKNVREKG
FSLGRFSDDY LKHFRIAVIR FEGRPVAFAN LLETYSHDLA SLDLMRAHPD APKLTMEFMM
VGLIQHYKSH GYARFSLGMV PLSGLQPRRG APLTQRLGSM VFRRGEQLYN FQGLRRFKDK
FQPDWEPRYM AVPAGLDPLV ALADTAALIA GGLTGLVKR