| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1187 |
|---|
| Symbol | |
|---|
| ID | 3716957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1354889 |
|---|
| End bp | 1355659 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_346919 |
|---|
| Protein GI | 77457414 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.206395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCCGT ATTTCTCCCT GCAAGGCCGC ACCGCCCTGG TGACCGGCGG CACCCGTGGT
ATCGGCAAAA TGATCGCCAA GGCCTATGTC GAGGCCGGCG CCCGCGTGTA CGTCTGCTCC
CGTGACGCGG AAGCCTGTCA TCAAACCGCT GAAGAACTCA GTGCTCTGGG CACTTGTCTG
GGCATCGCAG CGAATCTGGC GACGGAAGAA GGCGTGAAAG AGCTGGCCGC GCGACTGGGC
GAACAGATCA CTCATCTGGA CATTCTGGTG AACAACGCCG GCACGACGTG GGGCGCGCCG
CTGGAGAGCT ACCCGGTCAA GGGCTGGGAA AAGGTCATGC AACTCAACGT GACGTCGGTG
TTCAGCTGCA TCCAGCAGTT TCTGCCGTTG TTGCGTAAAT CCGGGTCGGC GGCCAATCCG
GCGCGGATCA TCAACATCGG TTCGGTGGCG GGGATTTCTT CCTTCGGCGA ACAGGCCTAC
GCCTACGGGC CGAGCAAGGC CGCCCTGCAT CAACTGTCAC GGATTCTCGC CCGGGAACTG
GTGAGCCAGC ACATCAACGT CAACGTCATC GCACCGGGGC GCTTCCCGAG CAAGATGACC
CAGCACATCG GCAGCGACCA GCAGGCGCTG GCCGATGACA CCGCGCTGAT CCCGATGAAA
CGCTGGGGCC GCGAGGAAGA GATGGCGGCG CTGGCGATCA GCCTGGCGAG TACCGCCGGG
GCGTACATGA CCGGGAATAT CATTCCGCTG GATGGCGGGT TCAGTCTTTA G
|
|---|
| Protein sequence | MHPYFSLQGR TALVTGGTRG IGKMIAKAYV EAGARVYVCS RDAEACHQTA EELSALGTCL
GIAANLATEE GVKELAARLG EQITHLDILV NNAGTTWGAP LESYPVKGWE KVMQLNVTSV
FSCIQQFLPL LRKSGSAANP ARIINIGSVA GISSFGEQAY AYGPSKAALH QLSRILAREL
VSQHINVNVI APGRFPSKMT QHIGSDQQAL ADDTALIPMK RWGREEEMAA LAISLASTAG
AYMTGNIIPL DGGFSL
|
|---|
| |