Gene Pfl01_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1177 
Symbol 
ID3716889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1347876 
End bp1348994 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346909 
Protein GI77457404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.209584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTACC AACCGAATGA CCTGCTCAGC CGTCATTTTC AGGAAAGCGG CCACGACCTC 
ATCAGCAAGG TCGAAGAACA ACTCAACCTG GTGTCACCCG ACAGCCCGAA TTCCCCCATT
TACCGAGACA TGATCCTGAC CGTGCTGCGC ATGGCCCAGG AAGACCACAA CCGCTGGAAC
GCCAAGATCA CCCTGCAAGC CCTGCGCGAA CTGGAGCAGG CCTTTCGCAC CCTTGAACAG
TTCAAGGGGC GACGCAAGGT CACGGTGTTC GGTTCGGCTC GAACCCCGGT CGAACATCCC
CTTTACGCCA TGGCTCGGGA ACTCGGGGCC TCGCTGGCTC GCTCGAACAT GATGGTCATC
ACTGGTGCCG GCGGCGGAAT CATGGCCGCG GCCCATGAAG GCGCCGGCCG CGATCACAGC
CTGGGGTTCA ATATCACCCT GCCCTTCGAA CAACATGCCA ACCCCACCGT GGACGGCACC
AACAACCTGC TGCCGTTCCA TTTTTTCTTC ACCCGCAAGC TGTTCTTCGT CAAGGAAGCC
GATGCGCTGG TGTTGTGCCC CGGCGGGTTC GGCACCCTGG ACGAAGCCCT GGAAGTGCTC
ACGCTGATCC AGACCGGCAA AAGCCCCTTG GTGCCGGTGG TTCTGCTGGA CGCACCGGGC
GGGACGTTCT GGCAAGGCGC GCTGGACTTC ATCCGCCAGC AACTGGAGGA AAATCGCTAC
ATCCTGCCGA CCGACCTGAA GCTGATGCGC CTGGTCTACA ACGTTGAAGA GGCGGTGGAG
CAGATCAACC AGTTCTACGG CAACTTCCAT TCCAGCCGCT GGCTCAAGCG CCAGTTTGTC
ATTCGCATGA ACCACAAGCT GAGCGATCAG GCCCTCGACC ATATGCAGGA AGCGTTTGCC
GATCTGTGCC TGAGCGATCA GTTCCATCAA CACGCATACA GCGGCGAAGA ACACGACGAG
GCTCAATTCA GCCACCTCAC GCGTCTGGCA TTCGCCTTCA ACGCCCGGGA TCACGGGCGT
CTGCGGGAGC TGGTGGACTA CATCAATCTG CCGGAAAACT GGGCCCAGTC AAAACCCCAG
ACCGCGCAAC GCACCCGCGA ACCGTCGAAG GTAACGTGA
 
Protein sequence
MPYQPNDLLS RHFQESGHDL ISKVEEQLNL VSPDSPNSPI YRDMILTVLR MAQEDHNRWN 
AKITLQALRE LEQAFRTLEQ FKGRRKVTVF GSARTPVEHP LYAMARELGA SLARSNMMVI
TGAGGGIMAA AHEGAGRDHS LGFNITLPFE QHANPTVDGT NNLLPFHFFF TRKLFFVKEA
DALVLCPGGF GTLDEALEVL TLIQTGKSPL VPVVLLDAPG GTFWQGALDF IRQQLEENRY
ILPTDLKLMR LVYNVEEAVE QINQFYGNFH SSRWLKRQFV IRMNHKLSDQ ALDHMQEAFA
DLCLSDQFHQ HAYSGEEHDE AQFSHLTRLA FAFNARDHGR LRELVDYINL PENWAQSKPQ
TAQRTREPSK VT