Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1172 |
Symbol | |
ID | 3716884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1344544 |
End bp | 1345107 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | Pyocin R2_PP, lytic enzyme |
Protein accession | YP_346904 |
Protein GI | 77457399 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.350599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATCA CTGAAGACAA CCTACTCAAC ATCATGCCCA ACGCCCGCCG CCAAGCGGGC GTTTTTGTTT CACCGCTCAA CGATGCGATG GCGCGCCATC GCATCGACAC GCCCAAGCGT ATTGCCGCGT TTCTCGCCCA GATCGGACAC GAATCGGGGC AATTGCAGTA CGTGCGTGAA CTGGGCAACA ACCAATACCT GAGCAAGTAC GACACCGGTA CGCTGGCGTT GCGATTGGGC AACACGCCCG AGGCCGATGG CGACGGGCAG AAGTATCGCG GGCGCGGGCT GATCCAGATC ACCGGCCGCG CCAACTATCG CCAGTGCAGC CTCGGGCTGT TCGGTGACGA GCGCTTGCTG GCGCTGCCGG AACTGCTGGA ACAACCGCAA TGGGCGGCCG AGTCCGCCGC GTGGTTCTGG GCGCAGAACG GTTTGAACGC GCTGGCGGAT CAGGATCAGT TCAACAGCAT TACCCGGCGG ATCAACGGAG GGTTGAACGG TTTGCAGGAT CGCCTGGAAC TCTGGGGGCG GGCGAGGGCG GTGTTATGCC TGCCTTCGGT CTGA
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Protein sequence | MQITEDNLLN IMPNARRQAG VFVSPLNDAM ARHRIDTPKR IAAFLAQIGH ESGQLQYVRE LGNNQYLSKY DTGTLALRLG NTPEADGDGQ KYRGRGLIQI TGRANYRQCS LGLFGDERLL ALPELLEQPQ WAAESAAWFW AQNGLNALAD QDQFNSITRR INGGLNGLQD RLELWGRARA VLCLPSV
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