Gene Pfl01_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1172 
Symbol 
ID3716884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1344544 
End bp1345107 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID 
ProductPyocin R2_PP, lytic enzyme 
Protein accessionYP_346904 
Protein GI77457399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.350599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCA CTGAAGACAA CCTACTCAAC ATCATGCCCA ACGCCCGCCG CCAAGCGGGC 
GTTTTTGTTT CACCGCTCAA CGATGCGATG GCGCGCCATC GCATCGACAC GCCCAAGCGT
ATTGCCGCGT TTCTCGCCCA GATCGGACAC GAATCGGGGC AATTGCAGTA CGTGCGTGAA
CTGGGCAACA ACCAATACCT GAGCAAGTAC GACACCGGTA CGCTGGCGTT GCGATTGGGC
AACACGCCCG AGGCCGATGG CGACGGGCAG AAGTATCGCG GGCGCGGGCT GATCCAGATC
ACCGGCCGCG CCAACTATCG CCAGTGCAGC CTCGGGCTGT TCGGTGACGA GCGCTTGCTG
GCGCTGCCGG AACTGCTGGA ACAACCGCAA TGGGCGGCCG AGTCCGCCGC GTGGTTCTGG
GCGCAGAACG GTTTGAACGC GCTGGCGGAT CAGGATCAGT TCAACAGCAT TACCCGGCGG
ATCAACGGAG GGTTGAACGG TTTGCAGGAT CGCCTGGAAC TCTGGGGGCG GGCGAGGGCG
GTGTTATGCC TGCCTTCGGT CTGA
 
Protein sequence
MQITEDNLLN IMPNARRQAG VFVSPLNDAM ARHRIDTPKR IAAFLAQIGH ESGQLQYVRE 
LGNNQYLSKY DTGTLALRLG NTPEADGDGQ KYRGRGLIQI TGRANYRQCS LGLFGDERLL
ALPELLEQPQ WAAESAAWFW AQNGLNALAD QDQFNSITRR INGGLNGLQD RLELWGRARA
VLCLPSV