Gene Pfl01_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1168 
Symbol 
ID3716880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1341638 
End bp1342558 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content62% 
IMG OID 
Producttail fiber protein, putative 
Protein accessionYP_346900 
Protein GI77457395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.966259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACTATC CCAAAAGCGT ACCCAGCGTC GGGCTGGTGA ACGGGCAATT TGTCGATGAG 
GATCCCGTCG CCGGAAAACC CGGCTCGCTG ATTCCTGCCG CTTGGGGCAA CGGCGTCACG
CAGGAAATTC TCAGTGTCGT ACAGGCCGCC GGCATGACGC CCAACGAGGC GAACACTCAT
CAACTGCTCG ACGCACTGCG CAGTCCGGGG TTGTTCACGA CGGCTGCGCA ATTCGATGTC
AGCCGATCGG CTGCAACGGC CGAGTTTGTC CAGCGGGCGC TGGGCAACTA CGCCAGCGCT
CGCGGCATCT CCGGCTCGAC CCAACTGACC CTGGCCGATA TCGGCTGCTC GATCGGGATG
GGCGGTAACG CTGCGTACAC CGTGACCTTG CCGGACGCCA CTGCAGTGCC CAGCGGCGCG
ACGATCAGCC TGCATTGCCG AAACAGCGCA GCGGTCACGG TTGCCAGTAA AACCGGTACG
CAGATCAGCC CCCAGGGGGC CTATCTGGGT TCGATCACGA TGAACGCGGG CGAGAGCGCA
ACCTTCGTCC GGGAGTCGGG TGTCTGGGTC GTTTACGGCA CCGCAGCGTT GAAGTATTCG
GCGCTCTATG CGTCGCAGTT CGCCACGGCC GGATATCAGA AACTTCCCAG CGGCTTGATC
GTGCAGTGGG TGACCGGGGG CTCCGATGCG AATGGAGTCA TGACGGTGTC GTTGCCGATG
ATGTTTCCCA ATGCTGTCCT CGGCGGGATC GCCAATGAGG GTTATCCGGC AGGCTGGGGC
AGTTCCAACG TCACTGTCTG GGCATTCGAC GGGGCCAACT CCACGACATC GACGGTTGTT
GCCAGGGTTC GCAATGTCCT GGCGTCGAGT GTGAAGGCTG AACCTGGAAT CTCGGGGCGC
ATATTGGTTT GGGGACGATA A
 
Protein sequence
MDYPKSVPSV GLVNGQFVDE DPVAGKPGSL IPAAWGNGVT QEILSVVQAA GMTPNEANTH 
QLLDALRSPG LFTTAAQFDV SRSAATAEFV QRALGNYASA RGISGSTQLT LADIGCSIGM
GGNAAYTVTL PDATAVPSGA TISLHCRNSA AVTVASKTGT QISPQGAYLG SITMNAGESA
TFVRESGVWV VYGTAALKYS ALYASQFATA GYQKLPSGLI VQWVTGGSDA NGVMTVSLPM
MFPNAVLGGI ANEGYPAGWG SSNVTVWAFD GANSTTSTVV ARVRNVLASS VKAEPGISGR
ILVWGR