Gene Pfl01_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1165 
Symbol 
ID3716758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1339312 
End bp1339827 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content62% 
IMG OID 
Productputative tail fiber assembly-like protein 
Protein accessionYP_346897 
Protein GI77457392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.82003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA TTCAGGAACT GCATCAATTC GAAGACGGCT TGCGTCCGGT ACCACCTTCT 
GCCGCCCATG ACTGGGACGG TGAGCAATGG CATGCCAGCG CTGACAAAGC CGCGTTACTG
GAACAGCAGG AAACCGAACG CCTGTGCGAC CGGGTCGATG CCGCCGCCGA CAGTGCGCGC
ACGACTTTGG CCGGCGACCC GCTCAAAGCG CTGGAATACG CCCAGGCGGC TGTTGACGCT
CAAGCCTTTC AAGACGCCGG TTATCCAAAA AAGGAAGTGC CGCTGTCCGT CGCTGCCTGG
ATCGCCAAGG GCCGTTCGGC AAAGCAGTCG GCCGAGCAGA TTCTCGACAA GGCCGCCCAG
CTCAGCGACA GCCTGCTGAC CCTGCGCACC TTGCGCCTGA AAGCCAAGAC CCGGATCCGT
GCGTTTGCGA GCAAGAGCCA GATGGATCAG GCCCGAGCTG CCGCCGATGA GGCGCTGCAG
GCCATTCGTG AACTGACCGC CAACCCGACC TCGTAA
 
Protein sequence
MNIIQELHQF EDGLRPVPPS AAHDWDGEQW HASADKAALL EQQETERLCD RVDAAADSAR 
TTLAGDPLKA LEYAQAAVDA QAFQDAGYPK KEVPLSVAAW IAKGRSAKQS AEQILDKAAQ
LSDSLLTLRT LRLKAKTRIR AFASKSQMDQ ARAAADEALQ AIRELTANPT S