Gene Pfl01_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1145 
Symbol 
ID3716723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1321833 
End bp1322999 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content61% 
IMG OID 
ProductPhage tail sheath protein FI-like 
Protein accessionYP_346877 
Protein GI77457372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGG TTCTGAACTT CGAGCACAAC GGCATTACCG TCAATGCCAC CGAGTCCCCC 
GAGGCCATGG GTGGCCTGGG TGACAACGTC ATCGGTCTGG TCGGCACCGC GCCGAAAGCC
GATCCGCTGA TTCCGCGCAA CGCACCGTTT CGCATCAACA GCTTCACTAC CCACGCGCTG
CTCGATCCGA CCGGCTCGGA AGAGGGCACC CTGTACCATG CGGTTTACCA GATCCTCAAA
GTGGTCAAGG TGCCGGTGTA CGTGGTGATC GTCGAAGCGG GCGCAACCCC GGCCGATACC
GTCAACGCGG TGATCGGCGG CGTTGATCCA ACCACCGGTC GCAAACTCGG TCTGGCCGCA
CTGGGCAGTG TCCCGGAAGA CCTGACCATC ATCGGCGCGC CGGGCTTCAC CGGCACCAAG
GCTGTGGCCA GCGAGTTCGC CTCGTTCGGC AAGCGCATCA AGGCCCGTGT GGTGCTGGAC
GGCAAGGACG TCTCGGTTGC CGACCAAGTG CTGTACAGCC AGGAGCTGGG CGGTGCGGAT
CTGGGTTTTG ATCGTTGCCT GGTGGTGCAC AACATGCCGG CCGTGTACTC GAAAGCGGCG
AAGAAAAACG TGTTCCTCGC GCCATCGAGC CTGGCGATTG CCGCGCTGGC CAAGGTCAAG
CAATGGGAAA GCCCGGGCAA CCAGGTGACC TACGCCGAAG ACGTGTCCCG GGTCGTTGAG
TACAACATCC TCGACACCTC CACCGAAGGC GATCTGCTTA ACCGCTACGG CGTCAGCTAT
TACGCCCGCA CCATCCTTGG CGGCTTCTCG CTGCTGGGCA ACCGTTCGAT CACCGGCAAG
TTCATCAGCT ACGTCGGTCT TGAAGACGCC ATCAGCCGCA AGCTGGTGAA GGCCGGCCAG
AAAGCCATGG CGAAGAACCT GACCAAGTCG TTCATGGATC AGGAAGTCAA ACGCATCAAC
GACTGGCTGC AAACCCTGGT CGCCGACGAA ACCATTCCCG GCGGCAGCGT ATATCTGCAC
CCGGAACTCA ACAGCGTCGA GAAGTACAAG AACGGCACCT GGTACGTGGT CATCGACTAC
GGCCGCTACG CGCCGAACGA ACACATGGTT TATCAACTCA ACGCCCGCGA TGAAATCATC
GAGCAGTTCC TGGAGGACGT TCTCTAA
 
Protein sequence
MAEVLNFEHN GITVNATESP EAMGGLGDNV IGLVGTAPKA DPLIPRNAPF RINSFTTHAL 
LDPTGSEEGT LYHAVYQILK VVKVPVYVVI VEAGATPADT VNAVIGGVDP TTGRKLGLAA
LGSVPEDLTI IGAPGFTGTK AVASEFASFG KRIKARVVLD GKDVSVADQV LYSQELGGAD
LGFDRCLVVH NMPAVYSKAA KKNVFLAPSS LAIAALAKVK QWESPGNQVT YAEDVSRVVE
YNILDTSTEG DLLNRYGVSY YARTILGGFS LLGNRSITGK FISYVGLEDA ISRKLVKAGQ
KAMAKNLTKS FMDQEVKRIN DWLQTLVADE TIPGGSVYLH PELNSVEKYK NGTWYVVIDY
GRYAPNEHMV YQLNARDEII EQFLEDVL