Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1143 |
Symbol | |
ID | 3716721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1318538 |
End bp | 1320991 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | Phage tail Collar |
Protein accession | YP_346875 |
Protein GI | 77457370 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.514331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACT ATTACACCCT GCTCACCAAC GCAGGGATTG CCTACGAAAC CGCCTGCAAG GCAGCGGGCG TACCGATCAA GCTGACGCAG ATTTCCGTCG GCGATGGCGG CGGCGCGGTC TACAACCCGG CCGCGACGGC TACCGCGCTG AAACGCGAAG TCTGGCGCGG ACCGCTCAAT GCGCTGTTCC AGGACGAGAA AAATCCGAGC TGGCTGCTCG CCGAAGTCAC CATCCCGCCG GACGTCGGCG GCTGGTACGT GCGTGAAGCC GGTCTGTGGA CCGACACCGG GATTCTCTAC GCCATCGTCA AATACCCGGA ATCGTTCAAA CCGGTTCTGG CAACGTCCGG CTCGGGCAAA GAGTTTTATA TCCGCTCGAT TTTCGAGACC AGCAATGCCT CGCTGGTGAC GCTGCTGATC GACGACACCG TGGTCAAGGC CACTCGTGCG TGGGTCATGA GCTACCTCGC CGAAGAACTC GGCAAACTCG ACGGCAAGCA ATCGGTACGT GTCGCCGCCA ACGCCAACGT CGTGTTGAAC GGTGCGCAGC AGATCGACGG CGTGGCGGTG ATTGCCGGCG ACCGCGTGCT GCTGCCGAAC CAGACCCTGG CCAAGGACAA CGGCCTGTGG ATCGTCGCCA ACGGTGACTG GATTCGGGCC AACGATGCCA ACGTCAGCGC CAAGGTCACA CCGGGCCTGA CGGTGATGGT GGAGGAGGGT ACGCTCAACG GCGATTCGCT GTGGCACCTG ACCACCAATG CGCCGATTAC TCTTGGCACA ACCGCGCTGA CATTCAAGAT GCTGGCAGGG CGCACCGGGA TTGCCGCCGG CACCTACAAA AGTCTGAGCG TCGACGAATA CGGCCGCGCG ACGGCCGGCT CGAATCCTGA CACGCTGGCC GGTTTTGGCA TCAAGGATTC GTACACCAAG GCTGAAGTCG AGGCGCTGAT TGCCAAGGCA TCGGCGTTGC CGGTGGGGTC GATTGTCGCG TTCCCGGTTG ACTCGCCACC TCCGGGCTTT CTGGAGCTGG ACAACAGCGT CAAGAGCAGC GCGACCTACC CGGACTTGAG CGCCTATCTG GGCGGCAAGT TCAACAAGGG GGATGAGGGT GTCGGGAATT TCCGGTTGCC TGAGGCACGT GGGGAGTTTT TGCGCGGTTG GGATCATGGG CGTGGGGTAG ATGGCGGACG TGCTCAAGGA AGTTCTCAGA CGGATAGTCT GAAGGCTCAC TACCATTTAA TTCCGACAGG CTCGGGAGGT GGACAGGCCG TTGACCCGAA TGGAGAGATT CCGACAGTAG TGTTGAAGGA TACGGCTGCT GACTGGGTAT TGCGTACGGA AGGTGACAAT GCTGAGCTGA GTATCGGTCG TGTAAGAACC TATAACTTCG GCGCCGCTAC AGAAACCCGC CCCCGCAACA TCGCCGTCAT GTGGTGCATC AAGGCCTGGA ACGCCCCGGT CAATCAGGGA AACATCGACG TAGCGGCACT GGTCAAGGAA GTCTCGCGGC TCGGATCTGC CGTTCCGGTA GGTGCCGTCA TGGCGTTCCC GACGGGGATA GTGCCTCCTG GCTTTCTTGA GCTGAATGGC AGTGTGCAGA ACACTTCGAC TTATCCGGAT TTGGCGGCAT ATCTCGGCAC CACTTACAAC AAAGGTGATG AGGGTGCAGG CAACTTCCGG TTGCCGGAGT CTCGCGGTGA GTTCCTGCGA GGCTGGGATC ATGGGCGCGG TGTGGATGCA GGACGTGGGA TAGGTACGAA TCAAGGCCAG TCGATGGTCG ATCACTACCA CACGGTTCTG ACTGCCGATG CCGGAGGAGT GCTTAATCCC ATTGCTGGCA ATCTGGTAGG TAGCTTTACC AACTTGGCGC CGATCTCCAA GCCAGCGGGA GCCGGGGTAC TGGGGGCAAC GCTCACCTCA AGTATTCACG GTCCGGCAGC GGAAAAAGGT GGCACTGAAA CGCGTCCACG CAACCTGGCG GTCATGTGGT GCATCAAAGC CTGGAACGCG CCGATCAATC AGGGAAATAT TGATATCGCA GCGCTTGCCG TGCTCGCACA GCAAGCTTCT GAAACCAATC AAGGCACAGC AAAAGTTGCC ACCCAGGCGC AAACCAATGC CGGTGCCGAT GACAGCGTCA TTGTCACGCC GAAAAAATTG ACGTGGGGCT TTCAGTTTCA GAAAAGCGGC ATCGGTTACT GCGTTTTTCC GTCCTGGCTG GGTGGATTCA TTATTCAGTG GGGGGTGTAC ACCATCGTCT CCAGTACGAC TGACCAAACA ATCGCTTTTC CTCTCACGTT TCCCTCTACG GCGCTATCAG CCGTCGCGCT CAGTGACTAT ACCCCCGGTT CCGGGTCAGT CGGATTCGTT GCGATGGGGG CTCTGAACAA GGCTGGTTTT ACGGTTCGGT CTTCTTCCGG TACTTCTACT CGATGGCTGG CAGTCGGTTG CTAA
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Protein sequence | MADYYTLLTN AGIAYETACK AAGVPIKLTQ ISVGDGGGAV YNPAATATAL KREVWRGPLN ALFQDEKNPS WLLAEVTIPP DVGGWYVREA GLWTDTGILY AIVKYPESFK PVLATSGSGK EFYIRSIFET SNASLVTLLI DDTVVKATRA WVMSYLAEEL GKLDGKQSVR VAANANVVLN GAQQIDGVAV IAGDRVLLPN QTLAKDNGLW IVANGDWIRA NDANVSAKVT PGLTVMVEEG TLNGDSLWHL TTNAPITLGT TALTFKMLAG RTGIAAGTYK SLSVDEYGRA TAGSNPDTLA GFGIKDSYTK AEVEALIAKA SALPVGSIVA FPVDSPPPGF LELDNSVKSS ATYPDLSAYL GGKFNKGDEG VGNFRLPEAR GEFLRGWDHG RGVDGGRAQG SSQTDSLKAH YHLIPTGSGG GQAVDPNGEI PTVVLKDTAA DWVLRTEGDN AELSIGRVRT YNFGAATETR PRNIAVMWCI KAWNAPVNQG NIDVAALVKE VSRLGSAVPV GAVMAFPTGI VPPGFLELNG SVQNTSTYPD LAAYLGTTYN KGDEGAGNFR LPESRGEFLR GWDHGRGVDA GRGIGTNQGQ SMVDHYHTVL TADAGGVLNP IAGNLVGSFT NLAPISKPAG AGVLGATLTS SIHGPAAEKG GTETRPRNLA VMWCIKAWNA PINQGNIDIA ALAVLAQQAS ETNQGTAKVA TQAQTNAGAD DSVIVTPKKL TWGFQFQKSG IGYCVFPSWL GGFIIQWGVY TIVSSTTDQT IAFPLTFPST ALSAVALSDY TPGSGSVGFV AMGALNKAGF TVRSSSGTST RWLAVGC
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