| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1141 |
|---|
| Symbol | |
|---|
| ID | 3716719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1316910 |
|---|
| End bp | 1317905 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | baseplate J-like protein |
|---|
| Protein accession | YP_346873 |
|---|
| Protein GI | 77457368 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.364618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGT TGATCCCCGG CCAGAATCAG TTGGCCGAAC CCTCCTTGAT CAAGGTCGAT
GCCTTCGAGG ATCTGCTCGC CGAGTTCAAG ACCTTCGTGG TCGAGTACGT CGGCGCGCGC
TCGCCGCAGA GCGCGGAAAA ACTCAAGACC AGCCTGGAAA ACGAAAGCGA ACTGCTGACC
CTGGCTCTGG AGGCCTTTTG CGTTCGCCTG CAAACCCACG AACGCAAATA CAACGCCCGC
ATCAAGCAGA TGCTGGCGTG GTGGGCCACC GGCAGCAACC TCGATGCGCG GCTAGCGGAC
ATGGGCCTGG AGCGGCAGTT GCTCGACCCG GGCGACCCGG CAGCATTCCC GCCGGTGCCG
GCGATCTACG AAAGCGACGA TGACGCCCGG CTGCGCTATT ACCTGGCACC CCATGCGCCG
GCGGCGGGTT CGCGGATGCA GTATCGCCGC GAGGTCTTCA CCCTCGGTGA AAGGCCGACG
GTGAAAGTCG AATCCACCGA GGCCGGTGTG GTGAACGTCA CCTACACCTT TGACCCGGAC
GGTCTTGCCG CACAGGTCAA GGACGGTAAC GGTCGTCGCA CCGCACCGGG TGAAGTGCAA
GTCACCGTGC TTGCCCGCGA GGGCGACGGT TCACCGTCCC CGACGCTGCT CGAAGGTGTA
CGCCAACACT TTGCCCGGCC CGATGTTTGT CCGGAGACGG ACAAGGTCAC AGTCAAAGGC
GCAGAGATTC AGCGCTACAA AATCCGCGTC GTGGCCAAGA TCAATTCCGG CCCGGATTCG
GGCCTGACCA AGGTCGCCGC GCAGCAGCAT TTGCAGGCCT ACGCCGACAG TTGCCATCGC
CTGGAAGGCC GGGTCGATCC GAGCTGGATC GACTACACGC TGCACAGCGC CGGCGCCGTG
CAATTGCAGA TTCTTGAACC GCTGGCGCCG ATCGTCTGCA GCGCATTTCA AGCGCCGTAC
TGCACGGTGG TCGAAGTCGA GGTGCAGACA CTATGA
|
|---|
| Protein sequence | MSMLIPGQNQ LAEPSLIKVD AFEDLLAEFK TFVVEYVGAR SPQSAEKLKT SLENESELLT
LALEAFCVRL QTHERKYNAR IKQMLAWWAT GSNLDARLAD MGLERQLLDP GDPAAFPPVP
AIYESDDDAR LRYYLAPHAP AAGSRMQYRR EVFTLGERPT VKVESTEAGV VNVTYTFDPD
GLAAQVKDGN GRRTAPGEVQ VTVLAREGDG SPSPTLLEGV RQHFARPDVC PETDKVTVKG
AEIQRYKIRV VAKINSGPDS GLTKVAAQQH LQAYADSCHR LEGRVDPSWI DYTLHSAGAV
QLQILEPLAP IVCSAFQAPY CTVVEVEVQT L
|
|---|
| |