| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1132 |
|---|
| Symbol | |
|---|
| ID | 3716710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1308419 |
|---|
| End bp | 1309426 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase sigma factor RpoS |
|---|
| Protein accession | YP_346864 |
|---|
| Protein GI | 77457359 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTCA GTAAAGAAGT GCCGGAGTTT GACATCGACG ATGAGGTTCT CCTGATGGAG
ACCGGCATCG ATTCGGATTC GATGTCGAAT GATGAAGGGG CTGCTCCACC TTCCGTTCGT
GCCAAATCCA AACACTCCGC TTCACTTAAA CAACATAAGT ACATCGATTA CACTCGGGCA
CTCGATGCCA CGCAGCTGTA CCTCAACGAA ATCGGCTTTT CCCCACTGCT CTCCCCGGAA
GAAGAAGTTC ATTTTGCGCG CTTGTCGCAA AGTGGCGATC CTGCCGGGCG CAAGCGCATG
ATCGAAAGTA ACCTGCGGCT GGTGGTCAAG ATCGCCCGGC GTTACGTCAA TCGGGGGCTG
TCGCTGCTGG ATCTGATCGA AGAGGGCAAC CTCGGACTGA TCCGAGCGGT GGAAAAGTTC
GATCCTGAGC GCGGCTTCCG CTTCTCGACC TACGCAACCT GGTGGATTCG TCAGACCATC
GAACGCGCGA TCATGAATCA GACCCGGACC ATCCGGCTGC CGATTCATGT GGTCAAGGAA
CTCAACGTGT ACCTGCGGGC TGCACGGGAG CTGACGCAAA AGCTCGACCA CGAACCTTCA
CCCGAAGAAA TCGCCAACCT GCTGGAAAAA CCGGTGGGCG AGGTCAAGCG CATGCTGGGC
CTGAACGAGC GGGTTTCTTC GGTCGACGTC TCGCTGGGTC CGGATTCGGA TAAAACCCTG
CTGGACACCC TGACGGATGA CCGTCCGACT GATCCGTGCG AACTGCTGCA GGATGACGAT
CTGTCGCAGA GCATCGATCA ATGGCTCTCG GAGCTGACCG ACAAGCAACG CGAGGTGGTG
GTACGCCGCT TCGGTCTGCG CGGCCACGAG AGCAGCACGC TGGAAGATGT AGGCCTGGAG
ATCGGCCTGA CCCGGGAACG GGTGAGACAG ATCCAGGTGG AAGGCCTTAA GCGCCTTCGG
GAAATTCTCG AGAAAAACGG CCTGTCGAGC GAGTCGCTGT TTCAATAA
|
|---|
| Protein sequence | MALSKEVPEF DIDDEVLLME TGIDSDSMSN DEGAAPPSVR AKSKHSASLK QHKYIDYTRA
LDATQLYLNE IGFSPLLSPE EEVHFARLSQ SGDPAGRKRM IESNLRLVVK IARRYVNRGL
SLLDLIEEGN LGLIRAVEKF DPERGFRFST YATWWIRQTI ERAIMNQTRT IRLPIHVVKE
LNVYLRAARE LTQKLDHEPS PEEIANLLEK PVGEVKRMLG LNERVSSVDV SLGPDSDKTL
LDTLTDDRPT DPCELLQDDD LSQSIDQWLS ELTDKQREVV VRRFGLRGHE SSTLEDVGLE
IGLTRERVRQ IQVEGLKRLR EILEKNGLSS ESLFQ
|
|---|
| |